Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRFBP1Q8NEF9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SRFBP1Q8NEF9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.7■■□□□ 1.06
SRFBP1Q8NEF9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SRFBP1Q8NEF9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.7■■□□□ 1.06
SRFBP1Q8NEF9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SRFBP1Q8NEF9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.7■■□□□ 1.06
SRFBP1Q8NEF9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRFBP1Q8NEF9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRFBP1Q8NEF9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SRFBP1Q8NEF9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRFBP1Q8NEF9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRFBP1Q8NEF9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.69■■□□□ 1.06
SRFBP1Q8NEF9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRFBP1Q8NEF9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRFBP1Q8NEF9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.69■■□□□ 1.06
SRFBP1Q8NEF9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
SRFBP1Q8NEF9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRFBP1Q8NEF9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRFBP1Q8NEF9 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.69■■□□□ 1.06
SRFBP1Q8NEF9 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.69■■□□□ 1.06
SRFBP1Q8NEF9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SRFBP1Q8NEF9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SRFBP1Q8NEF9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRFBP1Q8NEF9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.68■■□□□ 1.06
SRFBP1Q8NEF9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SRFBP1Q8NEF9 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.68■■□□□ 1.06
SRFBP1Q8NEF9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SRFBP1Q8NEF9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SRFBP1Q8NEF9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.68■■□□□ 1.06
SRFBP1Q8NEF9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SRFBP1Q8NEF9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SRFBP1Q8NEF9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.68■■□□□ 1.06
SRFBP1Q8NEF9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SRFBP1Q8NEF9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRFBP1Q8NEF9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRFBP1Q8NEF9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRFBP1Q8NEF9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRFBP1Q8NEF9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRFBP1Q8NEF9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRFBP1Q8NEF9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SRFBP1Q8NEF9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRFBP1Q8NEF9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SRFBP1Q8NEF9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
SRFBP1Q8NEF9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.67■■□□□ 1.06
SRFBP1Q8NEF9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SRFBP1Q8NEF9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.67■■□□□ 1.06
SRFBP1Q8NEF9 MTDHP2-201ENST00000601468 714 ntBASIC21.67■■□□□ 1.06
SRFBP1Q8NEF9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRFBP1Q8NEF9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SRFBP1Q8NEF9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SRFBP1Q8NEF9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
SRFBP1Q8NEF9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRFBP1Q8NEF9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRFBP1Q8NEF9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.66■■□□□ 1.06
SRFBP1Q8NEF9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRFBP1Q8NEF9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SRFBP1Q8NEF9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRFBP1Q8NEF9 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.65■■□□□ 1.06
SRFBP1Q8NEF9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRFBP1Q8NEF9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRFBP1Q8NEF9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SRFBP1Q8NEF9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.64■■□□□ 1.06
SRFBP1Q8NEF9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.64■■□□□ 1.05
SRFBP1Q8NEF9 AC005703.6-201ENST00000623265 1329 ntBASIC21.64■■□□□ 1.05
SRFBP1Q8NEF9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.64■■□□□ 1.05
SRFBP1Q8NEF9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRFBP1Q8NEF9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRFBP1Q8NEF9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.64■■□□□ 1.05
SRFBP1Q8NEF9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRFBP1Q8NEF9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRFBP1Q8NEF9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SRFBP1Q8NEF9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SRFBP1Q8NEF9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SRFBP1Q8NEF9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SRFBP1Q8NEF9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SRFBP1Q8NEF9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SRFBP1Q8NEF9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.63■■□□□ 1.05
SRFBP1Q8NEF9 AC010997.5-201ENST00000609182 354 ntBASIC21.63■■□□□ 1.05
SRFBP1Q8NEF9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.63■■□□□ 1.05
SRFBP1Q8NEF9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.63■■□□□ 1.05
SRFBP1Q8NEF9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.63■■□□□ 1.05
SRFBP1Q8NEF9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SRFBP1Q8NEF9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SRFBP1Q8NEF9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.62■■□□□ 1.05
SRFBP1Q8NEF9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.62■■□□□ 1.05
SRFBP1Q8NEF9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.62■■□□□ 1.05
SRFBP1Q8NEF9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRFBP1Q8NEF9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRFBP1Q8NEF9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRFBP1Q8NEF9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SRFBP1Q8NEF9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SRFBP1Q8NEF9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.61■■□□□ 1.05
SRFBP1Q8NEF9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SRFBP1Q8NEF9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SRFBP1Q8NEF9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SRFBP1Q8NEF9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
SRFBP1Q8NEF9 TSPY9P-201ENST00000440215 945 ntBASIC21.61■■□□□ 1.05
SRFBP1Q8NEF9 TSPY11P-201ENST00000442607 1045 ntBASIC21.61■■□□□ 1.05
SRFBP1Q8NEF9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms