Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.85■□□□□ 0.45
C3orf56Q8N813 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
C3orf56Q8N813 C17orf82-201ENST00000623772 1530 ntBASIC17.84■□□□□ 0.45
C3orf56Q8N813 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C3orf56Q8N813 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.84■□□□□ 0.45
C3orf56Q8N813 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
C3orf56Q8N813 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
C3orf56Q8N813 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
C3orf56Q8N813 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C3orf56Q8N813 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C3orf56Q8N813 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C3orf56Q8N813 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
C3orf56Q8N813 AC006455.2-201ENST00000429931 906 ntBASIC17.83■□□□□ 0.44
C3orf56Q8N813 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
C3orf56Q8N813 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
C3orf56Q8N813 AC097639.1-201ENST00000565519 1891 ntBASIC17.83■□□□□ 0.44
C3orf56Q8N813 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C3orf56Q8N813 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C3orf56Q8N813 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C3orf56Q8N813 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
C3orf56Q8N813 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
C3orf56Q8N813 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C3orf56Q8N813 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C3orf56Q8N813 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
C3orf56Q8N813 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C3orf56Q8N813 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.82■□□□□ 0.44
C3orf56Q8N813 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.82■□□□□ 0.44
C3orf56Q8N813 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.82■□□□□ 0.44
C3orf56Q8N813 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
C3orf56Q8N813 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C3orf56Q8N813 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C3orf56Q8N813 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.81■□□□□ 0.44
C3orf56Q8N813 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.81■□□□□ 0.44
C3orf56Q8N813 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C3orf56Q8N813 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C3orf56Q8N813 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C3orf56Q8N813 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
C3orf56Q8N813 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
C3orf56Q8N813 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C3orf56Q8N813 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.8■□□□□ 0.44
C3orf56Q8N813 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C3orf56Q8N813 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C3orf56Q8N813 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
C3orf56Q8N813 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C3orf56Q8N813 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
C3orf56Q8N813 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.8■□□□□ 0.44
C3orf56Q8N813 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.8■□□□□ 0.44
C3orf56Q8N813 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
C3orf56Q8N813 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.8■□□□□ 0.44
C3orf56Q8N813 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.8■□□□□ 0.44
C3orf56Q8N813 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
C3orf56Q8N813 AL354811.1-201ENST00000610286 706 ntBASIC17.8■□□□□ 0.44
C3orf56Q8N813 MIR6084-201ENST00000622012 110 ntBASIC17.8■□□□□ 0.44
C3orf56Q8N813 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
C3orf56Q8N813 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
C3orf56Q8N813 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
C3orf56Q8N813 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
C3orf56Q8N813 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
C3orf56Q8N813 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.79■□□□□ 0.44
C3orf56Q8N813 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
C3orf56Q8N813 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.79■□□□□ 0.44
C3orf56Q8N813 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.79■□□□□ 0.44
C3orf56Q8N813 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
C3orf56Q8N813 CCDC92B-201ENST00000575506 885 ntBASIC17.79■□□□□ 0.44
C3orf56Q8N813 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.79■□□□□ 0.44
C3orf56Q8N813 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.79■□□□□ 0.44
C3orf56Q8N813 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
C3orf56Q8N813 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C3orf56Q8N813 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.78■□□□□ 0.44
C3orf56Q8N813 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.78■□□□□ 0.44
C3orf56Q8N813 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
C3orf56Q8N813 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.78■□□□□ 0.44
C3orf56Q8N813 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
C3orf56Q8N813 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.78■□□□□ 0.44
C3orf56Q8N813 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
C3orf56Q8N813 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
C3orf56Q8N813 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
C3orf56Q8N813 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
C3orf56Q8N813 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C3orf56Q8N813 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.77■□□□□ 0.44
C3orf56Q8N813 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
C3orf56Q8N813 KRT18P14-201ENST00000534205 1250 ntBASIC17.77■□□□□ 0.44
C3orf56Q8N813 AC012414.1-201ENST00000556676 535 ntBASIC17.77■□□□□ 0.44
C3orf56Q8N813 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.77■□□□□ 0.44
C3orf56Q8N813 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C3orf56Q8N813 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C3orf56Q8N813 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
C3orf56Q8N813 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C3orf56Q8N813 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC17.76■□□□□ 0.43
C3orf56Q8N813 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
C3orf56Q8N813 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.76■□□□□ 0.43
C3orf56Q8N813 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.76■□□□□ 0.43
C3orf56Q8N813 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C3orf56Q8N813 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.76■□□□□ 0.43
C3orf56Q8N813 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
C3orf56Q8N813 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
C3orf56Q8N813 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C3orf56Q8N813 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.76■□□□□ 0.43
C3orf56Q8N813 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C3orf56Q8N813 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms