Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
SIX5Q8N196 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.42■■□□□ 1.34
SIX5Q8N196 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SIX5Q8N196 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.41■■□□□ 1.34
SIX5Q8N196 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.41■■□□□ 1.34
SIX5Q8N196 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SIX5Q8N196 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
SIX5Q8N196 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SIX5Q8N196 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.41■■□□□ 1.34
SIX5Q8N196 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.41■■□□□ 1.34
SIX5Q8N196 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SIX5Q8N196 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SIX5Q8N196 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.4■■□□□ 1.34
SIX5Q8N196 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.4■■□□□ 1.34
SIX5Q8N196 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.4■■□□□ 1.34
SIX5Q8N196 ERN1-208ENST00000606895 2068 ntBASIC23.4■■□□□ 1.34
SIX5Q8N196 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.4■■□□□ 1.34
SIX5Q8N196 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
SIX5Q8N196 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SIX5Q8N196 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SIX5Q8N196 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.39■■□□□ 1.34
SIX5Q8N196 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
SIX5Q8N196 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
SIX5Q8N196 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SIX5Q8N196 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SIX5Q8N196 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.39■■□□□ 1.33
SIX5Q8N196 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SIX5Q8N196 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SIX5Q8N196 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.39■■□□□ 1.33
SIX5Q8N196 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
SIX5Q8N196 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SIX5Q8N196 TSPY26P-201ENST00000476365 1326 ntBASIC23.38■■□□□ 1.33
SIX5Q8N196 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SIX5Q8N196 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.38■■□□□ 1.33
SIX5Q8N196 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SIX5Q8N196 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.38■■□□□ 1.33
SIX5Q8N196 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
SIX5Q8N196 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
SIX5Q8N196 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SIX5Q8N196 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
SIX5Q8N196 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SIX5Q8N196 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
SIX5Q8N196 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.37■■□□□ 1.33
SIX5Q8N196 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.37■■□□□ 1.33
SIX5Q8N196 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.37■■□□□ 1.33
SIX5Q8N196 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
SIX5Q8N196 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SIX5Q8N196 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SIX5Q8N196 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SIX5Q8N196 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SIX5Q8N196 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.36■■□□□ 1.33
SIX5Q8N196 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SIX5Q8N196 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.36■■□□□ 1.33
SIX5Q8N196 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SIX5Q8N196 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
SIX5Q8N196 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.35■■□□□ 1.33
SIX5Q8N196 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.35■■□□□ 1.33
SIX5Q8N196 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.35■■□□□ 1.33
SIX5Q8N196 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.35■■□□□ 1.33
SIX5Q8N196 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.35■■□□□ 1.33
SIX5Q8N196 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.35■■□□□ 1.33
SIX5Q8N196 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
SIX5Q8N196 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SIX5Q8N196 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
SIX5Q8N196 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
SIX5Q8N196 AC123595.1-201ENST00000440769 1046 ntBASIC23.34■■□□□ 1.33
SIX5Q8N196 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
SIX5Q8N196 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.34■■□□□ 1.33
SIX5Q8N196 AL358852.1-201ENST00000623174 1268 ntBASIC23.34■■□□□ 1.33
SIX5Q8N196 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
SIX5Q8N196 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.34■■□□□ 1.33
SIX5Q8N196 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SIX5Q8N196 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.33■■□□□ 1.33
SIX5Q8N196 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
SIX5Q8N196 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
SIX5Q8N196 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SIX5Q8N196 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SIX5Q8N196 AC027612.3-201ENST00000413684 1047 ntBASIC23.33■■□□□ 1.33
SIX5Q8N196 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.33■■□□□ 1.33
SIX5Q8N196 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
SIX5Q8N196 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.33■■□□□ 1.33
SIX5Q8N196 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.33■■□□□ 1.33
SIX5Q8N196 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.33■■□□□ 1.33
SIX5Q8N196 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.33■■□□□ 1.33
SIX5Q8N196 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
SIX5Q8N196 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
SIX5Q8N196 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.33■■□□□ 1.32
SIX5Q8N196 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SIX5Q8N196 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SIX5Q8N196 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SIX5Q8N196 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
SIX5Q8N196 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SIX5Q8N196 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.32■■□□□ 1.32
SIX5Q8N196 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SIX5Q8N196 MIR6084-201ENST00000622012 110 ntBASIC23.32■■□□□ 1.32
SIX5Q8N196 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.32■■□□□ 1.32
SIX5Q8N196 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SIX5Q8N196 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
SIX5Q8N196 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
SIX5Q8N196 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms