Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CPNE9Q8IYJ1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPNE9Q8IYJ1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CPNE9Q8IYJ1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
CPNE9Q8IYJ1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CPNE9Q8IYJ1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPNE9Q8IYJ1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.5■■□□□ 1.19
CPNE9Q8IYJ1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPNE9Q8IYJ1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.5■■□□□ 1.19
CPNE9Q8IYJ1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.49■■□□□ 1.19
CPNE9Q8IYJ1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPNE9Q8IYJ1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CPNE9Q8IYJ1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.49■■□□□ 1.19
CPNE9Q8IYJ1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.49■■□□□ 1.19
CPNE9Q8IYJ1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.49■■□□□ 1.19
CPNE9Q8IYJ1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.49■■□□□ 1.19
CPNE9Q8IYJ1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.49■■□□□ 1.19
CPNE9Q8IYJ1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
CPNE9Q8IYJ1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.49■■□□□ 1.19
CPNE9Q8IYJ1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPNE9Q8IYJ1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 RARRES2P1-201ENST00000474487 481 ntBASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 ALDH1A3-203ENST00000557963 1670 ntBASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPNE9Q8IYJ1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPNE9Q8IYJ1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPNE9Q8IYJ1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPNE9Q8IYJ1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.47■■□□□ 1.19
CPNE9Q8IYJ1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CPNE9Q8IYJ1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.47■■□□□ 1.19
CPNE9Q8IYJ1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.47■■□□□ 1.19
CPNE9Q8IYJ1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CPNE9Q8IYJ1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPNE9Q8IYJ1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPNE9Q8IYJ1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.46■■□□□ 1.19
CPNE9Q8IYJ1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CPNE9Q8IYJ1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CPNE9Q8IYJ1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CPNE9Q8IYJ1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
CPNE9Q8IYJ1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CPNE9Q8IYJ1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CPNE9Q8IYJ1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPNE9Q8IYJ1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.45■■□□□ 1.18
CPNE9Q8IYJ1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CPNE9Q8IYJ1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPNE9Q8IYJ1 AC004448.1-201ENST00000458332 883 ntBASIC22.45■■□□□ 1.18
CPNE9Q8IYJ1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
CPNE9Q8IYJ1 AC137630.3-201ENST00000607245 391 ntBASIC22.45■■□□□ 1.18
CPNE9Q8IYJ1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPNE9Q8IYJ1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPNE9Q8IYJ1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.45■■□□□ 1.18
CPNE9Q8IYJ1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPNE9Q8IYJ1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CPNE9Q8IYJ1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
CPNE9Q8IYJ1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CPNE9Q8IYJ1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CPNE9Q8IYJ1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CPNE9Q8IYJ1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.44■■□□□ 1.18
CPNE9Q8IYJ1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.44■■□□□ 1.18
CPNE9Q8IYJ1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
CPNE9Q8IYJ1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
CPNE9Q8IYJ1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.43■■□□□ 1.18
CPNE9Q8IYJ1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPNE9Q8IYJ1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPNE9Q8IYJ1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPNE9Q8IYJ1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.43■■□□□ 1.18
CPNE9Q8IYJ1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPNE9Q8IYJ1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPNE9Q8IYJ1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.43■■□□□ 1.18
CPNE9Q8IYJ1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CPNE9Q8IYJ1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CPNE9Q8IYJ1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.43■■□□□ 1.18
CPNE9Q8IYJ1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.43■■□□□ 1.18
CPNE9Q8IYJ1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CPNE9Q8IYJ1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.42■■□□□ 1.18
CPNE9Q8IYJ1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.42■■□□□ 1.18
CPNE9Q8IYJ1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CPNE9Q8IYJ1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CPNE9Q8IYJ1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CPNE9Q8IYJ1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CPNE9Q8IYJ1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.41■■□□□ 1.18
CPNE9Q8IYJ1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms