Protein–RNA interactions for Protein: Q8IYA2

CCDC144CP, Putative coiled-coil domain-containing protein 144C, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CPQ8IYA2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
CCDC144CPQ8IYA2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CCDC144CPQ8IYA2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CCDC144CPQ8IYA2 AL022069.1-201ENST00000568025 1636 ntBASIC26.87■■□□□ 1.89
CCDC144CPQ8IYA2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CCDC144CPQ8IYA2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CCDC144CPQ8IYA2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
CCDC144CPQ8IYA2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.86■■□□□ 1.89
CCDC144CPQ8IYA2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.86■■□□□ 1.89
CCDC144CPQ8IYA2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.86■■□□□ 1.89
CCDC144CPQ8IYA2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.86■■□□□ 1.89
CCDC144CPQ8IYA2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.86■■□□□ 1.89
CCDC144CPQ8IYA2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CCDC144CPQ8IYA2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CCDC144CPQ8IYA2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC144CPQ8IYA2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC144CPQ8IYA2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC144CPQ8IYA2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC144CPQ8IYA2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.85■■□□□ 1.89
CCDC144CPQ8IYA2 AC131281.2-201ENST00000520478 145 ntBASIC26.85■■□□□ 1.89
CCDC144CPQ8IYA2 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.85■■□□□ 1.89
CCDC144CPQ8IYA2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.85■■□□□ 1.89
CCDC144CPQ8IYA2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC144CPQ8IYA2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC144CPQ8IYA2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC144CPQ8IYA2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC144CPQ8IYA2 AC141586.4-201ENST00000624558 1573 ntBASIC26.84■■□□□ 1.89
CCDC144CPQ8IYA2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CCDC144CPQ8IYA2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.84■■□□□ 1.89
CCDC144CPQ8IYA2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
CCDC144CPQ8IYA2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CCDC144CPQ8IYA2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.84■■□□□ 1.89
CCDC144CPQ8IYA2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.84■■□□□ 1.89
CCDC144CPQ8IYA2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.84■■□□□ 1.89
CCDC144CPQ8IYA2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CCDC144CPQ8IYA2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CCDC144CPQ8IYA2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.84■■□□□ 1.89
CCDC144CPQ8IYA2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
CCDC144CPQ8IYA2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.84■■□□□ 1.89
CCDC144CPQ8IYA2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CCDC144CPQ8IYA2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.83■■□□□ 1.89
CCDC144CPQ8IYA2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.83■■□□□ 1.89
CCDC144CPQ8IYA2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.83■■□□□ 1.89
CCDC144CPQ8IYA2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CCDC144CPQ8IYA2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.83■■□□□ 1.89
CCDC144CPQ8IYA2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CCDC144CPQ8IYA2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.83■■□□□ 1.89
CCDC144CPQ8IYA2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.88
CCDC144CPQ8IYA2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.82■■□□□ 1.88
CCDC144CPQ8IYA2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CCDC144CPQ8IYA2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.82■■□□□ 1.88
CCDC144CPQ8IYA2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.82■■□□□ 1.88
CCDC144CPQ8IYA2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.82■■□□□ 1.88
CCDC144CPQ8IYA2 MTDHP2-201ENST00000601468 714 ntBASIC26.82■■□□□ 1.88
CCDC144CPQ8IYA2 SNX5-217ENST00000606557 1087 ntBASIC26.82■■□□□ 1.88
CCDC144CPQ8IYA2 AL117332.1-201ENST00000622628 974 ntBASIC26.82■■□□□ 1.88
CCDC144CPQ8IYA2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
CCDC144CPQ8IYA2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.82■■□□□ 1.88
CCDC144CPQ8IYA2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.82■■□□□ 1.88
CCDC144CPQ8IYA2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CCDC144CPQ8IYA2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CCDC144CPQ8IYA2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.81■■□□□ 1.88
CCDC144CPQ8IYA2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CCDC144CPQ8IYA2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.81■■□□□ 1.88
CCDC144CPQ8IYA2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CCDC144CPQ8IYA2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.8■■□□□ 1.88
CCDC144CPQ8IYA2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.8■■□□□ 1.88
CCDC144CPQ8IYA2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.8■■□□□ 1.88
CCDC144CPQ8IYA2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.8■■□□□ 1.88
CCDC144CPQ8IYA2 MIR6724-1-201ENST00000616420 92 ntBASIC26.8■■□□□ 1.88
CCDC144CPQ8IYA2 MIR6724-2-201ENST00000616483 92 ntBASIC26.8■■□□□ 1.88
CCDC144CPQ8IYA2 MIR6724-4-201ENST00000617390 92 ntBASIC26.8■■□□□ 1.88
CCDC144CPQ8IYA2 MIR6724-3-201ENST00000622482 92 ntBASIC26.8■■□□□ 1.88
CCDC144CPQ8IYA2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.8■■□□□ 1.88
CCDC144CPQ8IYA2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CCDC144CPQ8IYA2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CCDC144CPQ8IYA2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.8■■□□□ 1.88
CCDC144CPQ8IYA2 AC004448.1-201ENST00000458332 883 ntBASIC26.79■■□□□ 1.88
CCDC144CPQ8IYA2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.79■■□□□ 1.88
CCDC144CPQ8IYA2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.79■■□□□ 1.88
CCDC144CPQ8IYA2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC144CPQ8IYA2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC144CPQ8IYA2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
CCDC144CPQ8IYA2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
CCDC144CPQ8IYA2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.78■■□□□ 1.88
CCDC144CPQ8IYA2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.78■■□□□ 1.88
CCDC144CPQ8IYA2 MIR3621-201ENST00000580529 85 ntBASIC26.78■■□□□ 1.88
CCDC144CPQ8IYA2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC144CPQ8IYA2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.78■■□□□ 1.88
CCDC144CPQ8IYA2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC144CPQ8IYA2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC144CPQ8IYA2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC144CPQ8IYA2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC144CPQ8IYA2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC144CPQ8IYA2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC144CPQ8IYA2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC144CPQ8IYA2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.77■■□□□ 1.88
CCDC144CPQ8IYA2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC144CPQ8IYA2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.77■■□□□ 1.88
CCDC144CPQ8IYA2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms