Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
SMC5Q8IY18 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SMC5Q8IY18 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC28.37■■■□□ 2.13
SMC5Q8IY18 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SMC5Q8IY18 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
SMC5Q8IY18 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC28.36■■■□□ 2.13
SMC5Q8IY18 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC28.36■■■□□ 2.13
SMC5Q8IY18 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SMC5Q8IY18 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SMC5Q8IY18 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SMC5Q8IY18 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SMC5Q8IY18 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SMC5Q8IY18 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
SMC5Q8IY18 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC28.35■■■□□ 2.13
SMC5Q8IY18 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC28.35■■■□□ 2.13
SMC5Q8IY18 DUSP8P3-201ENST00000399571 1760 ntBASIC28.35■■■□□ 2.13
SMC5Q8IY18 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SMC5Q8IY18 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC28.35■■■□□ 2.13
SMC5Q8IY18 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC28.34■■■□□ 2.13
SMC5Q8IY18 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC28.34■■■□□ 2.13
SMC5Q8IY18 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SMC5Q8IY18 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.34■■■□□ 2.13
SMC5Q8IY18 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
SMC5Q8IY18 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
SMC5Q8IY18 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
SMC5Q8IY18 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SMC5Q8IY18 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SMC5Q8IY18 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SMC5Q8IY18 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SMC5Q8IY18 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC28.33■■■□□ 2.13
SMC5Q8IY18 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
SMC5Q8IY18 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SMC5Q8IY18 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SMC5Q8IY18 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SMC5Q8IY18 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SMC5Q8IY18 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC28.33■■■□□ 2.12
SMC5Q8IY18 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SMC5Q8IY18 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC28.32■■■□□ 2.12
SMC5Q8IY18 AC004448.1-201ENST00000458332 883 ntBASIC28.32■■■□□ 2.12
SMC5Q8IY18 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC28.32■■■□□ 2.12
SMC5Q8IY18 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SMC5Q8IY18 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SMC5Q8IY18 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SMC5Q8IY18 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
SMC5Q8IY18 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SMC5Q8IY18 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC28.31■■■□□ 2.12
SMC5Q8IY18 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC28.31■■■□□ 2.12
SMC5Q8IY18 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC28.31■■■□□ 2.12
SMC5Q8IY18 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC28.31■■■□□ 2.12
SMC5Q8IY18 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
SMC5Q8IY18 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
SMC5Q8IY18 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC28.31■■■□□ 2.12
SMC5Q8IY18 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SMC5Q8IY18 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC28.31■■■□□ 2.12
SMC5Q8IY18 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SMC5Q8IY18 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
SMC5Q8IY18 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC28.3■■■□□ 2.12
SMC5Q8IY18 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SMC5Q8IY18 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SMC5Q8IY18 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SMC5Q8IY18 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SMC5Q8IY18 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC28.3■■■□□ 2.12
SMC5Q8IY18 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
SMC5Q8IY18 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SMC5Q8IY18 AC103724.3-201ENST00000564481 992 ntBASIC28.29■■■□□ 2.12
SMC5Q8IY18 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SMC5Q8IY18 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SMC5Q8IY18 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
SMC5Q8IY18 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SMC5Q8IY18 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SMC5Q8IY18 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
SMC5Q8IY18 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC28.28■■■□□ 2.12
SMC5Q8IY18 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SMC5Q8IY18 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
SMC5Q8IY18 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC28.28■■■□□ 2.12
SMC5Q8IY18 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC28.28■■■□□ 2.12
SMC5Q8IY18 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC28.28■■■□□ 2.12
SMC5Q8IY18 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
SMC5Q8IY18 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
SMC5Q8IY18 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
SMC5Q8IY18 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC28.28■■■□□ 2.12
SMC5Q8IY18 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SMC5Q8IY18 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SMC5Q8IY18 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SMC5Q8IY18 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SMC5Q8IY18 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
SMC5Q8IY18 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC28.27■■■□□ 2.12
SMC5Q8IY18 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SMC5Q8IY18 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SMC5Q8IY18 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.12
SMC5Q8IY18 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SMC5Q8IY18 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
SMC5Q8IY18 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SMC5Q8IY18 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SMC5Q8IY18 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SMC5Q8IY18 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC28.26■■■□□ 2.11
SMC5Q8IY18 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SMC5Q8IY18 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SMC5Q8IY18 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SMC5Q8IY18 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC28.25■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms