Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.5■■□□□ 1.67
CCDC60Q8IWA6 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.5■■□□□ 1.67
CCDC60Q8IWA6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC60Q8IWA6 ALDH1A3-203ENST00000557963 1670 ntBASIC25.5■■□□□ 1.67
CCDC60Q8IWA6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
CCDC60Q8IWA6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
CCDC60Q8IWA6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC60Q8IWA6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC60Q8IWA6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.5■■□□□ 1.67
CCDC60Q8IWA6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
CCDC60Q8IWA6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC60Q8IWA6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC60Q8IWA6 AC009102.2-201ENST00000606772 1639 ntBASIC25.49■■□□□ 1.67
CCDC60Q8IWA6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
CCDC60Q8IWA6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
CCDC60Q8IWA6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC60Q8IWA6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.49■■□□□ 1.67
CCDC60Q8IWA6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC60Q8IWA6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC60Q8IWA6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC60Q8IWA6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC60Q8IWA6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC60Q8IWA6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC60Q8IWA6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC60Q8IWA6 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.48■■□□□ 1.67
CCDC60Q8IWA6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.48■■□□□ 1.67
CCDC60Q8IWA6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.48■■□□□ 1.67
CCDC60Q8IWA6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC60Q8IWA6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC60Q8IWA6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
CCDC60Q8IWA6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC60Q8IWA6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC60Q8IWA6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC60Q8IWA6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
CCDC60Q8IWA6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC60Q8IWA6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC60Q8IWA6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC60Q8IWA6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC60Q8IWA6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
CCDC60Q8IWA6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.46■■□□□ 1.67
CCDC60Q8IWA6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.46■■□□□ 1.67
CCDC60Q8IWA6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.46■■□□□ 1.67
CCDC60Q8IWA6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.46■■□□□ 1.67
CCDC60Q8IWA6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.46■■□□□ 1.67
CCDC60Q8IWA6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC60Q8IWA6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
CCDC60Q8IWA6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCDC60Q8IWA6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCDC60Q8IWA6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCDC60Q8IWA6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCDC60Q8IWA6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCDC60Q8IWA6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC60Q8IWA6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
CCDC60Q8IWA6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.44■■□□□ 1.66
CCDC60Q8IWA6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.44■■□□□ 1.66
CCDC60Q8IWA6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC60Q8IWA6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC60Q8IWA6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
CCDC60Q8IWA6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC60Q8IWA6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC60Q8IWA6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
CCDC60Q8IWA6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC60Q8IWA6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC60Q8IWA6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.43■■□□□ 1.66
CCDC60Q8IWA6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.43■■□□□ 1.66
CCDC60Q8IWA6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.42■■□□□ 1.66
CCDC60Q8IWA6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC60Q8IWA6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC60Q8IWA6 UNC93B3-201ENST00000308076 687 ntBASIC25.42■■□□□ 1.66
CCDC60Q8IWA6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC60Q8IWA6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.42■■□□□ 1.66
CCDC60Q8IWA6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC60Q8IWA6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.41■■□□□ 1.66
CCDC60Q8IWA6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.41■■□□□ 1.66
CCDC60Q8IWA6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.41■■□□□ 1.66
CCDC60Q8IWA6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.41■■□□□ 1.66
CCDC60Q8IWA6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC60Q8IWA6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC60Q8IWA6 C17orf82-201ENST00000623772 1530 ntBASIC25.41■■□□□ 1.66
CCDC60Q8IWA6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC60Q8IWA6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC60Q8IWA6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
CCDC60Q8IWA6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC60Q8IWA6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.4■■□□□ 1.66
CCDC60Q8IWA6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CCDC60Q8IWA6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
CCDC60Q8IWA6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CCDC60Q8IWA6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CCDC60Q8IWA6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.39■■□□□ 1.65
CCDC60Q8IWA6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.38■■□□□ 1.65
CCDC60Q8IWA6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
CCDC60Q8IWA6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC60Q8IWA6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.38■■□□□ 1.65
CCDC60Q8IWA6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC60Q8IWA6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.38■■□□□ 1.65
CCDC60Q8IWA6 AC106739.1-201ENST00000617035 715 ntBASIC25.38■■□□□ 1.65
CCDC60Q8IWA6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC60Q8IWA6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC60Q8IWA6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.38■■□□□ 1.65
CCDC60Q8IWA6 AL139125.2-201ENST00000623134 1869 ntBASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms