Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20■□□□□ 0.79
LYSMD2Q8IV50 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD2Q8IV50 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD2Q8IV50 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20■□□□□ 0.79
LYSMD2Q8IV50 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD2Q8IV50 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD2Q8IV50 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20■□□□□ 0.79
LYSMD2Q8IV50 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20■□□□□ 0.79
LYSMD2Q8IV50 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD2Q8IV50 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD2Q8IV50 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.99■□□□□ 0.79
LYSMD2Q8IV50 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.99■□□□□ 0.79
LYSMD2Q8IV50 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
LYSMD2Q8IV50 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.99■□□□□ 0.79
LYSMD2Q8IV50 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.99■□□□□ 0.79
LYSMD2Q8IV50 AL162393.1-201ENST00000437852 946 ntBASIC19.99■□□□□ 0.79
LYSMD2Q8IV50 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LYSMD2Q8IV50 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD2Q8IV50 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD2Q8IV50 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD2Q8IV50 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
LYSMD2Q8IV50 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.99■□□□□ 0.79
LYSMD2Q8IV50 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD2Q8IV50 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD2Q8IV50 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD2Q8IV50 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD2Q8IV50 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD2Q8IV50 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LYSMD2Q8IV50 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD2Q8IV50 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD2Q8IV50 AC008813.1-201ENST00000536597 885 ntBASIC19.98■□□□□ 0.79
LYSMD2Q8IV50 AC148477.6-201ENST00000623746 465 ntBASIC19.98■□□□□ 0.79
LYSMD2Q8IV50 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD2Q8IV50 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD2Q8IV50 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD2Q8IV50 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD2Q8IV50 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD2Q8IV50 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.98■□□□□ 0.79
LYSMD2Q8IV50 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LYSMD2Q8IV50 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.97■□□□□ 0.79
LYSMD2Q8IV50 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD2Q8IV50 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.97■□□□□ 0.79
LYSMD2Q8IV50 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD2Q8IV50 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD2Q8IV50 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD2Q8IV50 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.97■□□□□ 0.79
LYSMD2Q8IV50 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD2Q8IV50 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD2Q8IV50 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD2Q8IV50 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD2Q8IV50 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD2Q8IV50 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD2Q8IV50 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LYSMD2Q8IV50 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD2Q8IV50 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
LYSMD2Q8IV50 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.96■□□□□ 0.79
LYSMD2Q8IV50 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LYSMD2Q8IV50 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD2Q8IV50 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD2Q8IV50 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD2Q8IV50 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.96■□□□□ 0.79
LYSMD2Q8IV50 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD2Q8IV50 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
LYSMD2Q8IV50 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD2Q8IV50 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
LYSMD2Q8IV50 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
LYSMD2Q8IV50 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD2Q8IV50 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD2Q8IV50 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD2Q8IV50 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD2Q8IV50 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD2Q8IV50 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LYSMD2Q8IV50 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD2Q8IV50 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LYSMD2Q8IV50 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
LYSMD2Q8IV50 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD2Q8IV50 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD2Q8IV50 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD2Q8IV50 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LYSMD2Q8IV50 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LYSMD2Q8IV50 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LYSMD2Q8IV50 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD2Q8IV50 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD2Q8IV50 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD2Q8IV50 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD2Q8IV50 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD2Q8IV50 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD2Q8IV50 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD2Q8IV50 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LYSMD2Q8IV50 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.93■□□□□ 0.78
LYSMD2Q8IV50 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD2Q8IV50 FBXW4P1-201ENST00000426721 2239 ntBASIC19.92■□□□□ 0.78
LYSMD2Q8IV50 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD2Q8IV50 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD2Q8IV50 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD2Q8IV50 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD2Q8IV50 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
LYSMD2Q8IV50 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.92■□□□□ 0.78
LYSMD2Q8IV50 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.92■□□□□ 0.78
LYSMD2Q8IV50 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms