Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB43Q86YS6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RAB43Q86YS6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB43Q86YS6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB43Q86YS6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.62■■□□□ 1.05
RAB43Q86YS6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.62■■□□□ 1.05
RAB43Q86YS6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAB43Q86YS6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB43Q86YS6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.62■■□□□ 1.05
RAB43Q86YS6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB43Q86YS6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB43Q86YS6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB43Q86YS6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB43Q86YS6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
RAB43Q86YS6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.6■■□□□ 1.05
RAB43Q86YS6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB43Q86YS6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RAB43Q86YS6 AC005703.6-201ENST00000623265 1329 ntBASIC21.6■■□□□ 1.05
RAB43Q86YS6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.6■■□□□ 1.05
RAB43Q86YS6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RAB43Q86YS6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.6■■□□□ 1.05
RAB43Q86YS6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAB43Q86YS6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.6■■□□□ 1.05
RAB43Q86YS6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAB43Q86YS6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.6■■□□□ 1.05
RAB43Q86YS6 AC133561.4-201ENST00000566112 224 ntBASIC21.6■■□□□ 1.05
RAB43Q86YS6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.6■■□□□ 1.05
RAB43Q86YS6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
RAB43Q86YS6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB43Q86YS6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.6■■□□□ 1.05
RAB43Q86YS6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RAB43Q86YS6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB43Q86YS6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
RAB43Q86YS6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.59■■□□□ 1.05
RAB43Q86YS6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RAB43Q86YS6 SRD5A1P1-201ENST00000442297 786 ntBASIC21.59■■□□□ 1.05
RAB43Q86YS6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.59■■□□□ 1.05
RAB43Q86YS6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB43Q86YS6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.59■■□□□ 1.05
RAB43Q86YS6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB43Q86YS6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB43Q86YS6 LINC00543-201ENST00000567234 1845 ntBASIC21.59■■□□□ 1.05
RAB43Q86YS6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB43Q86YS6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RAB43Q86YS6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.58■■□□□ 1.05
RAB43Q86YS6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.58■■□□□ 1.05
RAB43Q86YS6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.58■■□□□ 1.05
RAB43Q86YS6 AC005837.3-201ENST00000612163 286 ntBASIC21.58■■□□□ 1.05
RAB43Q86YS6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.58■■□□□ 1.04
RAB43Q86YS6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
RAB43Q86YS6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RAB43Q86YS6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.58■■□□□ 1.04
RAB43Q86YS6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAB43Q86YS6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RAB43Q86YS6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.57■■□□□ 1.04
RAB43Q86YS6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB43Q86YS6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB43Q86YS6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RAB43Q86YS6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB43Q86YS6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB43Q86YS6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAB43Q86YS6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB43Q86YS6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB43Q86YS6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB43Q86YS6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.56■■□□□ 1.04
RAB43Q86YS6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB43Q86YS6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAB43Q86YS6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.55■■□□□ 1.04
RAB43Q86YS6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RAB43Q86YS6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.55■■□□□ 1.04
RAB43Q86YS6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAB43Q86YS6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RAB43Q86YS6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB43Q86YS6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.54■■□□□ 1.04
RAB43Q86YS6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RAB43Q86YS6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.54■■□□□ 1.04
RAB43Q86YS6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.54■■□□□ 1.04
RAB43Q86YS6 PBX2P1-201ENST00000493219 1291 ntBASIC21.54■■□□□ 1.04
RAB43Q86YS6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.54■■□□□ 1.04
RAB43Q86YS6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
RAB43Q86YS6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.54■■□□□ 1.04
RAB43Q86YS6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB43Q86YS6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RAB43Q86YS6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAB43Q86YS6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RAB43Q86YS6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAB43Q86YS6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
RAB43Q86YS6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB43Q86YS6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RAB43Q86YS6 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.53■■□□□ 1.04
RAB43Q86YS6 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.53■■□□□ 1.04
RAB43Q86YS6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAB43Q86YS6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.53■■□□□ 1.04
RAB43Q86YS6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.53■■□□□ 1.04
RAB43Q86YS6 AC106739.1-201ENST00000617035 715 ntBASIC21.53■■□□□ 1.04
RAB43Q86YS6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB43Q86YS6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB43Q86YS6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAB43Q86YS6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB43Q86YS6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms