Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHD1LQ86WJ1 C9orf163-202ENST00000624034 2573 ntBASIC28.26■■■□□ 2.11
CHD1LQ86WJ1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHD1LQ86WJ1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
CHD1LQ86WJ1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHD1LQ86WJ1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHD1LQ86WJ1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CHD1LQ86WJ1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CHD1LQ86WJ1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CHD1LQ86WJ1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CHD1LQ86WJ1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CHD1LQ86WJ1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CHD1LQ86WJ1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
CHD1LQ86WJ1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
CHD1LQ86WJ1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC28.24■■■□□ 2.11
CHD1LQ86WJ1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CHD1LQ86WJ1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC28.24■■■□□ 2.11
CHD1LQ86WJ1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC28.24■■■□□ 2.11
CHD1LQ86WJ1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CHD1LQ86WJ1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CHD1LQ86WJ1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
CHD1LQ86WJ1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
CHD1LQ86WJ1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC28.23■■■□□ 2.11
CHD1LQ86WJ1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CHD1LQ86WJ1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
CHD1LQ86WJ1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
CHD1LQ86WJ1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CHD1LQ86WJ1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC28.22■■■□□ 2.11
CHD1LQ86WJ1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CHD1LQ86WJ1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
CHD1LQ86WJ1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CHD1LQ86WJ1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC28.22■■■□□ 2.11
CHD1LQ86WJ1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHD1LQ86WJ1 KRT8P33-201ENST00000508125 1423 ntBASIC28.21■■■□□ 2.11
CHD1LQ86WJ1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC28.21■■■□□ 2.11
CHD1LQ86WJ1 AC103724.3-201ENST00000564481 992 ntBASIC28.21■■■□□ 2.11
CHD1LQ86WJ1 AC012676.1-201ENST00000574705 1949 ntBASIC28.21■■■□□ 2.11
CHD1LQ86WJ1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC28.21■■■□□ 2.11
CHD1LQ86WJ1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC28.21■■■□□ 2.11
CHD1LQ86WJ1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC28.21■■■□□ 2.11
CHD1LQ86WJ1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHD1LQ86WJ1 AC092068.2-201ENST00000590491 1708 ntBASIC28.21■■■□□ 2.11
CHD1LQ86WJ1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CHD1LQ86WJ1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CHD1LQ86WJ1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
CHD1LQ86WJ1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC28.2■■■□□ 2.1
CHD1LQ86WJ1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CHD1LQ86WJ1 H19-210ENST00000439725 1929 ntTSL 2 BASIC28.2■■■□□ 2.1
CHD1LQ86WJ1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
CHD1LQ86WJ1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
CHD1LQ86WJ1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC28.19■■■□□ 2.1
CHD1LQ86WJ1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CHD1LQ86WJ1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC28.19■■■□□ 2.1
CHD1LQ86WJ1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CHD1LQ86WJ1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC28.18■■■□□ 2.1
CHD1LQ86WJ1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC28.18■■■□□ 2.1
CHD1LQ86WJ1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CHD1LQ86WJ1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CHD1LQ86WJ1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CHD1LQ86WJ1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
CHD1LQ86WJ1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CHD1LQ86WJ1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CHD1LQ86WJ1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CHD1LQ86WJ1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
CHD1LQ86WJ1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC28.17■■■□□ 2.1
CHD1LQ86WJ1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
CHD1LQ86WJ1 AC004448.1-201ENST00000458332 883 ntBASIC28.17■■■□□ 2.1
CHD1LQ86WJ1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CHD1LQ86WJ1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CHD1LQ86WJ1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC28.17■■■□□ 2.1
CHD1LQ86WJ1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC28.16■■■□□ 2.1
CHD1LQ86WJ1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC28.16■■■□□ 2.1
CHD1LQ86WJ1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CHD1LQ86WJ1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CHD1LQ86WJ1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CHD1LQ86WJ1 YBX1P4-201ENST00000392794 808 ntBASIC28.15■■■□□ 2.1
CHD1LQ86WJ1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC28.15■■■□□ 2.1
CHD1LQ86WJ1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC28.15■■■□□ 2.1
CHD1LQ86WJ1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC28.15■■■□□ 2.1
CHD1LQ86WJ1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CHD1LQ86WJ1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
CHD1LQ86WJ1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CHD1LQ86WJ1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC28.14■■■□□ 2.1
CHD1LQ86WJ1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC28.14■■■□□ 2.1
CHD1LQ86WJ1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
CHD1LQ86WJ1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC28.14■■■□□ 2.09
CHD1LQ86WJ1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
CHD1LQ86WJ1 DUSP8P3-201ENST00000399571 1760 ntBASIC28.14■■■□□ 2.09
CHD1LQ86WJ1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
CHD1LQ86WJ1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
CHD1LQ86WJ1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
CHD1LQ86WJ1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
CHD1LQ86WJ1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
CHD1LQ86WJ1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
CHD1LQ86WJ1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CHD1LQ86WJ1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CHD1LQ86WJ1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
CHD1LQ86WJ1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CHD1LQ86WJ1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC28.12■■■□□ 2.09
CHD1LQ86WJ1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms