Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MRPL55Q7Z7F7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MRPL55Q7Z7F7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MRPL55Q7Z7F7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
MRPL55Q7Z7F7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC14.56□□□□□ -0.08
MRPL55Q7Z7F7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MRPL55Q7Z7F7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MRPL55Q7Z7F7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 AC019171.1-201ENST00000601251 1056 ntBASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 BHLHE23-202ENST00000612929 1109 ntBASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 AL022069.1-201ENST00000568025 1636 ntBASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC14.55□□□□□ -0.08
MRPL55Q7Z7F7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPL55Q7Z7F7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPL55Q7Z7F7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC14.54□□□□□ -0.08
MRPL55Q7Z7F7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC14.54□□□□□ -0.08
MRPL55Q7Z7F7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC14.54□□□□□ -0.08
MRPL55Q7Z7F7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC14.54□□□□□ -0.08
MRPL55Q7Z7F7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC14.54□□□□□ -0.08
MRPL55Q7Z7F7 DUX4L18-201ENST00000553347 1267 ntBASIC14.54□□□□□ -0.08
MRPL55Q7Z7F7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPL55Q7Z7F7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPL55Q7Z7F7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC14.54□□□□□ -0.08
MRPL55Q7Z7F7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MRPL55Q7Z7F7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
MRPL55Q7Z7F7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MRPL55Q7Z7F7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MRPL55Q7Z7F7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC14.53□□□□□ -0.08
MRPL55Q7Z7F7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC14.53□□□□□ -0.08
MRPL55Q7Z7F7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MRPL55Q7Z7F7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MRPL55Q7Z7F7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MRPL55Q7Z7F7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MRPL55Q7Z7F7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MRPL55Q7Z7F7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
MRPL55Q7Z7F7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC14.53□□□□□ -0.08
MRPL55Q7Z7F7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MRPL55Q7Z7F7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MRPL55Q7Z7F7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MRPL55Q7Z7F7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MRPL55Q7Z7F7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
MRPL55Q7Z7F7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC14.52□□□□□ -0.08
MRPL55Q7Z7F7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MRPL55Q7Z7F7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
MRPL55Q7Z7F7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MRPL55Q7Z7F7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MRPL55Q7Z7F7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MRPL55Q7Z7F7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MRPL55Q7Z7F7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MRPL55Q7Z7F7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC14.52□□□□□ -0.09
MRPL55Q7Z7F7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC14.52□□□□□ -0.09
MRPL55Q7Z7F7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
MRPL55Q7Z7F7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MRPL55Q7Z7F7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
MRPL55Q7Z7F7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC14.52□□□□□ -0.09
MRPL55Q7Z7F7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MRPL55Q7Z7F7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MRPL55Q7Z7F7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MRPL55Q7Z7F7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MRPL55Q7Z7F7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MRPL55Q7Z7F7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MRPL55Q7Z7F7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC14.51□□□□□ -0.09
MRPL55Q7Z7F7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MRPL55Q7Z7F7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
MRPL55Q7Z7F7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MRPL55Q7Z7F7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MRPL55Q7Z7F7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC14.51□□□□□ -0.09
MRPL55Q7Z7F7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
MRPL55Q7Z7F7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC14.51□□□□□ -0.09
MRPL55Q7Z7F7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
MRPL55Q7Z7F7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
MRPL55Q7Z7F7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MRPL55Q7Z7F7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MRPL55Q7Z7F7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC14.5□□□□□ -0.09
MRPL55Q7Z7F7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
MRPL55Q7Z7F7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MRPL55Q7Z7F7 AC074183.2-201ENST00000623112 922 ntBASIC14.5□□□□□ -0.09
MRPL55Q7Z7F7 GAK-223ENST00000628912 497 ntTSL 5 BASIC14.5□□□□□ -0.09
MRPL55Q7Z7F7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MRPL55Q7Z7F7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MRPL55Q7Z7F7 PKD1P6-201ENST00000343738 4769 ntBASIC14.5□□□□□ -0.09
MRPL55Q7Z7F7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MRPL55Q7Z7F7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MRPL55Q7Z7F7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms