Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHFQ7M4L6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SHFQ7M4L6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHFQ7M4L6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SHFQ7M4L6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.52■□□□□ 0.87
SHFQ7M4L6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHFQ7M4L6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHFQ7M4L6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHFQ7M4L6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SHFQ7M4L6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
SHFQ7M4L6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SHFQ7M4L6 AL592293.1-201ENST00000502889 1188 ntBASIC20.51■□□□□ 0.87
SHFQ7M4L6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHFQ7M4L6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SHFQ7M4L6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.5■□□□□ 0.87
SHFQ7M4L6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHFQ7M4L6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHFQ7M4L6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHFQ7M4L6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHFQ7M4L6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SHFQ7M4L6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHFQ7M4L6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHFQ7M4L6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.5■□□□□ 0.87
SHFQ7M4L6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHFQ7M4L6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SHFQ7M4L6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHFQ7M4L6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHFQ7M4L6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.49■□□□□ 0.87
SHFQ7M4L6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SHFQ7M4L6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SHFQ7M4L6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHFQ7M4L6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
SHFQ7M4L6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.48■□□□□ 0.87
SHFQ7M4L6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHFQ7M4L6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHFQ7M4L6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHFQ7M4L6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SHFQ7M4L6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
SHFQ7M4L6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.48■□□□□ 0.87
SHFQ7M4L6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.48■□□□□ 0.87
SHFQ7M4L6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
SHFQ7M4L6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.48■□□□□ 0.87
SHFQ7M4L6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHFQ7M4L6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHFQ7M4L6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHFQ7M4L6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHFQ7M4L6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.47■□□□□ 0.87
SHFQ7M4L6 LINC00565-201ENST00000562710 2331 ntBASIC20.47■□□□□ 0.87
SHFQ7M4L6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHFQ7M4L6 AL592295.1-201ENST00000400984 884 ntBASIC20.47■□□□□ 0.87
SHFQ7M4L6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.47■□□□□ 0.87
SHFQ7M4L6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.47■□□□□ 0.87
SHFQ7M4L6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SHFQ7M4L6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.47■□□□□ 0.87
SHFQ7M4L6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHFQ7M4L6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SHFQ7M4L6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SHFQ7M4L6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.47■□□□□ 0.87
SHFQ7M4L6 DUSP8P3-201ENST00000399571 1760 ntBASIC20.46■□□□□ 0.87
SHFQ7M4L6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.46■□□□□ 0.87
SHFQ7M4L6 AC087393.1-201ENST00000582896 145 ntBASIC20.46■□□□□ 0.87
SHFQ7M4L6 MIR6765-201ENST00000614092 87 ntBASIC20.46■□□□□ 0.87
SHFQ7M4L6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHFQ7M4L6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHFQ7M4L6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.46■□□□□ 0.87
SHFQ7M4L6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.45■□□□□ 0.86
SHFQ7M4L6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHFQ7M4L6 AC090877.2-201ENST00000558441 1738 ntBASIC20.45■□□□□ 0.86
SHFQ7M4L6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHFQ7M4L6 SPCS2P3-201ENST00000500401 656 ntBASIC20.45■□□□□ 0.86
SHFQ7M4L6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SHFQ7M4L6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHFQ7M4L6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHFQ7M4L6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
SHFQ7M4L6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SHFQ7M4L6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SHFQ7M4L6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHFQ7M4L6 AC092068.2-201ENST00000590491 1708 ntBASIC20.44■□□□□ 0.86
SHFQ7M4L6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SHFQ7M4L6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHFQ7M4L6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.44■□□□□ 0.86
SHFQ7M4L6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
SHFQ7M4L6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.44■□□□□ 0.86
SHFQ7M4L6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHFQ7M4L6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHFQ7M4L6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.44■□□□□ 0.86
SHFQ7M4L6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHFQ7M4L6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHFQ7M4L6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHFQ7M4L6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHFQ7M4L6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHFQ7M4L6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.43■□□□□ 0.86
SHFQ7M4L6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHFQ7M4L6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHFQ7M4L6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
SHFQ7M4L6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHFQ7M4L6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHFQ7M4L6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHFQ7M4L6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHFQ7M4L6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms