Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.82■□□□□ 0.92
CHMP1BQ7LBR1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.82■□□□□ 0.92
CHMP1BQ7LBR1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP1BQ7LBR1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP1BQ7LBR1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP1BQ7LBR1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP1BQ7LBR1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP1BQ7LBR1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP1BQ7LBR1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.81■□□□□ 0.92
CHMP1BQ7LBR1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.81■□□□□ 0.92
CHMP1BQ7LBR1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CHMP1BQ7LBR1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP1BQ7LBR1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP1BQ7LBR1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CHMP1BQ7LBR1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP1BQ7LBR1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CHMP1BQ7LBR1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.8■□□□□ 0.92
CHMP1BQ7LBR1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.8■□□□□ 0.92
CHMP1BQ7LBR1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP1BQ7LBR1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.8■□□□□ 0.92
CHMP1BQ7LBR1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP1BQ7LBR1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP1BQ7LBR1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.8■□□□□ 0.92
CHMP1BQ7LBR1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CHMP1BQ7LBR1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CHMP1BQ7LBR1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP1BQ7LBR1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CHMP1BQ7LBR1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP1BQ7LBR1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP1BQ7LBR1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CHMP1BQ7LBR1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.79■□□□□ 0.92
CHMP1BQ7LBR1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
CHMP1BQ7LBR1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.79■□□□□ 0.92
CHMP1BQ7LBR1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CHMP1BQ7LBR1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP1BQ7LBR1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP1BQ7LBR1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.79■□□□□ 0.92
CHMP1BQ7LBR1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
CHMP1BQ7LBR1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP1BQ7LBR1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP1BQ7LBR1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.78■□□□□ 0.92
CHMP1BQ7LBR1 MIR6089-201ENST00000616698 64 ntBASIC20.78■□□□□ 0.92
CHMP1BQ7LBR1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP1BQ7LBR1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.78■□□□□ 0.92
CHMP1BQ7LBR1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP1BQ7LBR1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP1BQ7LBR1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP1BQ7LBR1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CHMP1BQ7LBR1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CHMP1BQ7LBR1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP1BQ7LBR1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP1BQ7LBR1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP1BQ7LBR1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP1BQ7LBR1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP1BQ7LBR1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP1BQ7LBR1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP1BQ7LBR1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP1BQ7LBR1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.76■□□□□ 0.91
CHMP1BQ7LBR1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP1BQ7LBR1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.76■□□□□ 0.91
CHMP1BQ7LBR1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.76■□□□□ 0.91
CHMP1BQ7LBR1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP1BQ7LBR1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP1BQ7LBR1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP1BQ7LBR1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP1BQ7LBR1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.75■□□□□ 0.91
CHMP1BQ7LBR1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP1BQ7LBR1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHMP1BQ7LBR1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP1BQ7LBR1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CHMP1BQ7LBR1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP1BQ7LBR1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.75■□□□□ 0.91
CHMP1BQ7LBR1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP1BQ7LBR1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CHMP1BQ7LBR1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.75■□□□□ 0.91
CHMP1BQ7LBR1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP1BQ7LBR1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.75■□□□□ 0.91
CHMP1BQ7LBR1 MIR6724-1-201ENST00000616420 92 ntBASIC20.75■□□□□ 0.91
CHMP1BQ7LBR1 MIR6724-2-201ENST00000616483 92 ntBASIC20.75■□□□□ 0.91
CHMP1BQ7LBR1 MIR6724-4-201ENST00000617390 92 ntBASIC20.75■□□□□ 0.91
CHMP1BQ7LBR1 MIR6724-3-201ENST00000622482 92 ntBASIC20.75■□□□□ 0.91
CHMP1BQ7LBR1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.75■□□□□ 0.91
CHMP1BQ7LBR1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP1BQ7LBR1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP1BQ7LBR1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP1BQ7LBR1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP1BQ7LBR1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP1BQ7LBR1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP1BQ7LBR1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.73■□□□□ 0.91
CHMP1BQ7LBR1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP1BQ7LBR1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP1BQ7LBR1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP1BQ7LBR1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.73■□□□□ 0.91
CHMP1BQ7LBR1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.73■□□□□ 0.91
CHMP1BQ7LBR1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CHMP1BQ7LBR1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP1BQ7LBR1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP1BQ7LBR1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP1BQ7LBR1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP1BQ7LBR1 SNX5-217ENST00000606557 1087 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms