Protein–RNA interactions for Protein: Q6XYD6

BRD3OS, BRD3 opposite strand, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3OSQ6XYD6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRD3OSQ6XYD6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRD3OSQ6XYD6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
BRD3OSQ6XYD6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRD3OSQ6XYD6 AC009102.2-201ENST00000606772 1639 ntBASIC18.5■□□□□ 0.55
BRD3OSQ6XYD6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRD3OSQ6XYD6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.5■□□□□ 0.55
BRD3OSQ6XYD6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
BRD3OSQ6XYD6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.5■□□□□ 0.55
BRD3OSQ6XYD6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRD3OSQ6XYD6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.5■□□□□ 0.55
BRD3OSQ6XYD6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
BRD3OSQ6XYD6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.5■□□□□ 0.55
BRD3OSQ6XYD6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.5■□□□□ 0.55
BRD3OSQ6XYD6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRD3OSQ6XYD6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.5■□□□□ 0.55
BRD3OSQ6XYD6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRD3OSQ6XYD6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRD3OSQ6XYD6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRD3OSQ6XYD6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.49■□□□□ 0.55
BRD3OSQ6XYD6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRD3OSQ6XYD6 AC142381.2-201ENST00000566120 298 ntBASIC18.49■□□□□ 0.55
BRD3OSQ6XYD6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRD3OSQ6XYD6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
BRD3OSQ6XYD6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
BRD3OSQ6XYD6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
BRD3OSQ6XYD6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRD3OSQ6XYD6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRD3OSQ6XYD6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BRD3OSQ6XYD6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
BRD3OSQ6XYD6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.48■□□□□ 0.55
BRD3OSQ6XYD6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRD3OSQ6XYD6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.48■□□□□ 0.55
BRD3OSQ6XYD6 AP003733.4-201ENST00000623785 1697 ntBASIC18.48■□□□□ 0.55
BRD3OSQ6XYD6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
BRD3OSQ6XYD6 AC099791.2-201ENST00000605725 427 ntBASIC18.48■□□□□ 0.55
BRD3OSQ6XYD6 AC138932.3-201ENST00000567634 1902 ntBASIC18.48■□□□□ 0.55
BRD3OSQ6XYD6 SYT6-210ENST00000641643 1587 ntBASIC18.47■□□□□ 0.55
BRD3OSQ6XYD6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRD3OSQ6XYD6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BRD3OSQ6XYD6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRD3OSQ6XYD6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRD3OSQ6XYD6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
BRD3OSQ6XYD6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
BRD3OSQ6XYD6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
BRD3OSQ6XYD6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.47■□□□□ 0.55
BRD3OSQ6XYD6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.47■□□□□ 0.55
BRD3OSQ6XYD6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BRD3OSQ6XYD6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRD3OSQ6XYD6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.47■□□□□ 0.55
BRD3OSQ6XYD6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
BRD3OSQ6XYD6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRD3OSQ6XYD6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRD3OSQ6XYD6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BRD3OSQ6XYD6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.46■□□□□ 0.55
BRD3OSQ6XYD6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRD3OSQ6XYD6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRD3OSQ6XYD6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.46■□□□□ 0.55
BRD3OSQ6XYD6 DUX4L19-201ENST00000557448 1267 ntBASIC18.46■□□□□ 0.55
BRD3OSQ6XYD6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BRD3OSQ6XYD6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
BRD3OSQ6XYD6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRD3OSQ6XYD6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRD3OSQ6XYD6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BRD3OSQ6XYD6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRD3OSQ6XYD6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.46■□□□□ 0.55
BRD3OSQ6XYD6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRD3OSQ6XYD6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD3OSQ6XYD6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD3OSQ6XYD6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.45■□□□□ 0.54
BRD3OSQ6XYD6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
BRD3OSQ6XYD6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD3OSQ6XYD6 AC092171.4-201ENST00000609130 632 ntBASIC18.45■□□□□ 0.54
BRD3OSQ6XYD6 AL161729.1-201ENST00000604104 1402 ntBASIC18.45■□□□□ 0.54
BRD3OSQ6XYD6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.45■□□□□ 0.54
BRD3OSQ6XYD6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.45■□□□□ 0.54
BRD3OSQ6XYD6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD3OSQ6XYD6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BRD3OSQ6XYD6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRD3OSQ6XYD6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRD3OSQ6XYD6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRD3OSQ6XYD6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD3OSQ6XYD6 AC020928.2-201ENST00000588717 2197 ntBASIC18.44■□□□□ 0.54
BRD3OSQ6XYD6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
BRD3OSQ6XYD6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.44■□□□□ 0.54
BRD3OSQ6XYD6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRD3OSQ6XYD6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.44■□□□□ 0.54
BRD3OSQ6XYD6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.44■□□□□ 0.54
BRD3OSQ6XYD6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRD3OSQ6XYD6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.44■□□□□ 0.54
BRD3OSQ6XYD6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRD3OSQ6XYD6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
BRD3OSQ6XYD6 ALDH1A3-203ENST00000557963 1670 ntBASIC18.44■□□□□ 0.54
BRD3OSQ6XYD6 AC142381.3-201ENST00000568208 1670 ntBASIC18.44■□□□□ 0.54
BRD3OSQ6XYD6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.44■□□□□ 0.54
BRD3OSQ6XYD6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.43■□□□□ 0.54
BRD3OSQ6XYD6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD3OSQ6XYD6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRD3OSQ6XYD6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
BRD3OSQ6XYD6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms