Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00575Q6W349 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00575Q6W349 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LINC00575Q6W349 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LINC00575Q6W349 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00575Q6W349 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00575Q6W349 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00575Q6W349 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00575Q6W349 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00575Q6W349 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00575Q6W349 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00575Q6W349 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00575Q6W349 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00575Q6W349 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LINC00575Q6W349 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00575Q6W349 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00575Q6W349 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00575Q6W349 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00575Q6W349 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00575Q6W349 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00575Q6W349 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00575Q6W349 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LINC00575Q6W349 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00575Q6W349 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LINC00575Q6W349 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
LINC00575Q6W349 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00575Q6W349 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00575Q6W349 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
LINC00575Q6W349 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00575Q6W349 AC242852.2-201ENST00000615738 1807 ntBASIC14.41□□□□□ -0.1
LINC00575Q6W349 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC00575Q6W349 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00575Q6W349 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00575Q6W349 DUX4L13-201ENST00000554103 1267 ntBASIC14.41□□□□□ -0.1
LINC00575Q6W349 DUX4L15-201ENST00000611059 1267 ntBASIC14.41□□□□□ -0.1
LINC00575Q6W349 DUX4L23-201ENST00000615195 1269 ntBASIC14.41□□□□□ -0.1
LINC00575Q6W349 DUX4L24-201ENST00000617576 1269 ntBASIC14.41□□□□□ -0.1
LINC00575Q6W349 DUX4L22-201ENST00000618238 1269 ntBASIC14.41□□□□□ -0.1
LINC00575Q6W349 DUX4L20-201ENST00000619712 1269 ntBASIC14.41□□□□□ -0.1
LINC00575Q6W349 DUX4L21-201ENST00000622058 1269 ntBASIC14.41□□□□□ -0.1
LINC00575Q6W349 DUX4L10-201ENST00000622460 1267 ntBASIC14.41□□□□□ -0.1
LINC00575Q6W349 DUX4L25-201ENST00000624915 1269 ntBASIC14.41□□□□□ -0.1
LINC00575Q6W349 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00575Q6W349 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
LINC00575Q6W349 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00575Q6W349 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00575Q6W349 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00575Q6W349 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00575Q6W349 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LINC00575Q6W349 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00575Q6W349 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00575Q6W349 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00575Q6W349 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00575Q6W349 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LINC00575Q6W349 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00575Q6W349 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC00575Q6W349 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00575Q6W349 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LINC00575Q6W349 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00575Q6W349 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00575Q6W349 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00575Q6W349 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00575Q6W349 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00575Q6W349 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00575Q6W349 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00575Q6W349 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00575Q6W349 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00575Q6W349 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LINC00575Q6W349 HLA-V-202ENST00000446817 847 ntBASIC14.39□□□□□ -0.11
LINC00575Q6W349 LINC01971-201ENST00000617888 1048 ntBASIC14.39□□□□□ -0.11
LINC00575Q6W349 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00575Q6W349 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00575Q6W349 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC00575Q6W349 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LINC00575Q6W349 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC00575Q6W349 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC00575Q6W349 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00575Q6W349 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00575Q6W349 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC00575Q6W349 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00575Q6W349 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC00575Q6W349 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00575Q6W349 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
LINC00575Q6W349 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00575Q6W349 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00575Q6W349 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LINC00575Q6W349 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC00575Q6W349 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC00575Q6W349 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00575Q6W349 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LINC00575Q6W349 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC00575Q6W349 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00575Q6W349 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00575Q6W349 ESRRAP2-201ENST00000418437 1549 ntBASIC14.37□□□□□ -0.11
LINC00575Q6W349 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00575Q6W349 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00575Q6W349 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC14.37□□□□□ -0.11
LINC00575Q6W349 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LINC00575Q6W349 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00575Q6W349 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms