Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM53Q6P2H8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
TMEM53Q6P2H8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
TMEM53Q6P2H8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TMEM53Q6P2H8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM53Q6P2H8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM53Q6P2H8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM53Q6P2H8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM53Q6P2H8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM53Q6P2H8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM53Q6P2H8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM53Q6P2H8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM53Q6P2H8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TMEM53Q6P2H8 AL592295.1-201ENST00000400984 884 ntBASIC20.61■□□□□ 0.89
TMEM53Q6P2H8 AC019171.1-201ENST00000601251 1056 ntBASIC20.61■□□□□ 0.89
TMEM53Q6P2H8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TMEM53Q6P2H8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM53Q6P2H8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM53Q6P2H8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TMEM53Q6P2H8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TMEM53Q6P2H8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM53Q6P2H8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM53Q6P2H8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM53Q6P2H8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM53Q6P2H8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM53Q6P2H8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM53Q6P2H8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TMEM53Q6P2H8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM53Q6P2H8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM53Q6P2H8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM53Q6P2H8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM53Q6P2H8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM53Q6P2H8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM53Q6P2H8 EP400NL-214ENST00000641289 2402 ntBASIC20.6■□□□□ 0.89
TMEM53Q6P2H8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM53Q6P2H8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM53Q6P2H8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM53Q6P2H8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TMEM53Q6P2H8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM53Q6P2H8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM53Q6P2H8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEM53Q6P2H8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
TMEM53Q6P2H8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM53Q6P2H8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TMEM53Q6P2H8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEM53Q6P2H8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.59■□□□□ 0.89
TMEM53Q6P2H8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TMEM53Q6P2H8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM53Q6P2H8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM53Q6P2H8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM53Q6P2H8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM53Q6P2H8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM53Q6P2H8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM53Q6P2H8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM53Q6P2H8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TMEM53Q6P2H8 AC010980.1-201ENST00000587192 1142 ntBASIC20.58■□□□□ 0.89
TMEM53Q6P2H8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM53Q6P2H8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM53Q6P2H8 SLC6A10P-202ENST00000431994 2058 ntBASIC20.58■□□□□ 0.88
TMEM53Q6P2H8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
TMEM53Q6P2H8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM53Q6P2H8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM53Q6P2H8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 AC022616.5-201ENST00000518796 181 ntBASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 AC007375.3-201ENST00000600936 2314 ntBASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 AL391422.3-201ENST00000603791 2761 ntBASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM53Q6P2H8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM53Q6P2H8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TMEM53Q6P2H8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM53Q6P2H8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM53Q6P2H8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM53Q6P2H8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TMEM53Q6P2H8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
TMEM53Q6P2H8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM53Q6P2H8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM53Q6P2H8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TMEM53Q6P2H8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM53Q6P2H8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM53Q6P2H8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM53Q6P2H8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms