Protein–RNA interactions for Protein: Q6P1A2

LPCAT3, Lysophospholipid acyltransferase 5, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3Q6P1A2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LPCAT3Q6P1A2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.16■□□□□ 0.66
LPCAT3Q6P1A2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LPCAT3Q6P1A2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LPCAT3Q6P1A2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LPCAT3Q6P1A2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LPCAT3Q6P1A2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LPCAT3Q6P1A2 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.16■□□□□ 0.66
LPCAT3Q6P1A2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.16■□□□□ 0.66
LPCAT3Q6P1A2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LPCAT3Q6P1A2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LPCAT3Q6P1A2 AC092068.2-201ENST00000590491 1708 ntBASIC19.14■□□□□ 0.66
LPCAT3Q6P1A2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LPCAT3Q6P1A2 ANOS2P-203ENST00000472227 1816 ntBASIC19.14■□□□□ 0.65
LPCAT3Q6P1A2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
LPCAT3Q6P1A2 AC093536.1-201ENST00000569153 554 ntBASIC19.14■□□□□ 0.65
LPCAT3Q6P1A2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LPCAT3Q6P1A2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LPCAT3Q6P1A2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LPCAT3Q6P1A2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LPCAT3Q6P1A2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.14■□□□□ 0.65
LPCAT3Q6P1A2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LPCAT3Q6P1A2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LPCAT3Q6P1A2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LPCAT3Q6P1A2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT3Q6P1A2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.13■□□□□ 0.65
LPCAT3Q6P1A2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.13■□□□□ 0.65
LPCAT3Q6P1A2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT3Q6P1A2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT3Q6P1A2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT3Q6P1A2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT3Q6P1A2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT3Q6P1A2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT3Q6P1A2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.13■□□□□ 0.65
LPCAT3Q6P1A2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT3Q6P1A2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LPCAT3Q6P1A2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT3Q6P1A2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT3Q6P1A2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.12■□□□□ 0.65
LPCAT3Q6P1A2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.12■□□□□ 0.65
LPCAT3Q6P1A2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
LPCAT3Q6P1A2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT3Q6P1A2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT3Q6P1A2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.12■□□□□ 0.65
LPCAT3Q6P1A2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LPCAT3Q6P1A2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT3Q6P1A2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT3Q6P1A2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT3Q6P1A2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT3Q6P1A2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT3Q6P1A2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT3Q6P1A2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LPCAT3Q6P1A2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LPCAT3Q6P1A2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.11■□□□□ 0.65
LPCAT3Q6P1A2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LPCAT3Q6P1A2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LPCAT3Q6P1A2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LPCAT3Q6P1A2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LPCAT3Q6P1A2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LPCAT3Q6P1A2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LPCAT3Q6P1A2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LPCAT3Q6P1A2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
LPCAT3Q6P1A2 AC007375.3-201ENST00000600936 2314 ntBASIC19.11■□□□□ 0.65
LPCAT3Q6P1A2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT3Q6P1A2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT3Q6P1A2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT3Q6P1A2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT3Q6P1A2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT3Q6P1A2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT3Q6P1A2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT3Q6P1A2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LPCAT3Q6P1A2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LPCAT3Q6P1A2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LPCAT3Q6P1A2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.1■□□□□ 0.65
LPCAT3Q6P1A2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LPCAT3Q6P1A2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.09■□□□□ 0.65
LPCAT3Q6P1A2 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.09■□□□□ 0.65
LPCAT3Q6P1A2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LPCAT3Q6P1A2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.09■□□□□ 0.65
LPCAT3Q6P1A2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LPCAT3Q6P1A2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms