Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TBC1D28Q2M2D7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TBC1D28Q2M2D7 AC005703.6-201ENST00000623265 1329 ntBASIC19.79■□□□□ 0.76
TBC1D28Q2M2D7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
TBC1D28Q2M2D7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.79■□□□□ 0.76
TBC1D28Q2M2D7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TBC1D28Q2M2D7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TBC1D28Q2M2D7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
TBC1D28Q2M2D7 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.79■□□□□ 0.76
TBC1D28Q2M2D7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.79■□□□□ 0.76
TBC1D28Q2M2D7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.79■□□□□ 0.76
TBC1D28Q2M2D7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TBC1D28Q2M2D7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
TBC1D28Q2M2D7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TBC1D28Q2M2D7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TBC1D28Q2M2D7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TBC1D28Q2M2D7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TBC1D28Q2M2D7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TBC1D28Q2M2D7 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.78■□□□□ 0.76
TBC1D28Q2M2D7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.78■□□□□ 0.76
TBC1D28Q2M2D7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TBC1D28Q2M2D7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TBC1D28Q2M2D7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TBC1D28Q2M2D7 AC093323.1-202ENST00000635031 2045 ntBASIC19.78■□□□□ 0.76
TBC1D28Q2M2D7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.78■□□□□ 0.76
TBC1D28Q2M2D7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TBC1D28Q2M2D7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TBC1D28Q2M2D7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TBC1D28Q2M2D7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.77■□□□□ 0.75
TBC1D28Q2M2D7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
TBC1D28Q2M2D7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.76■□□□□ 0.75
TBC1D28Q2M2D7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TBC1D28Q2M2D7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TBC1D28Q2M2D7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TBC1D28Q2M2D7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.76■□□□□ 0.75
TBC1D28Q2M2D7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.76■□□□□ 0.75
TBC1D28Q2M2D7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TBC1D28Q2M2D7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.76■□□□□ 0.75
TBC1D28Q2M2D7 MIR6724-1-201ENST00000616420 92 ntBASIC19.76■□□□□ 0.75
TBC1D28Q2M2D7 MIR6724-2-201ENST00000616483 92 ntBASIC19.76■□□□□ 0.75
TBC1D28Q2M2D7 MIR6724-4-201ENST00000617390 92 ntBASIC19.76■□□□□ 0.75
TBC1D28Q2M2D7 MIR6724-3-201ENST00000622482 92 ntBASIC19.76■□□□□ 0.75
TBC1D28Q2M2D7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TBC1D28Q2M2D7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TBC1D28Q2M2D7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TBC1D28Q2M2D7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D28Q2M2D7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D28Q2M2D7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D28Q2M2D7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TBC1D28Q2M2D7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D28Q2M2D7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D28Q2M2D7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D28Q2M2D7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D28Q2M2D7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TBC1D28Q2M2D7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.75■□□□□ 0.75
TBC1D28Q2M2D7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D28Q2M2D7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D28Q2M2D7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D28Q2M2D7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D28Q2M2D7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TBC1D28Q2M2D7 ABCB10P4-201ENST00000566803 2184 ntBASIC19.74■□□□□ 0.75
TBC1D28Q2M2D7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TBC1D28Q2M2D7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.74■□□□□ 0.75
TBC1D28Q2M2D7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.74■□□□□ 0.75
TBC1D28Q2M2D7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TBC1D28Q2M2D7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.74■□□□□ 0.75
TBC1D28Q2M2D7 AL356441.2-201ENST00000443009 864 ntBASIC19.74■□□□□ 0.75
TBC1D28Q2M2D7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.74■□□□□ 0.75
TBC1D28Q2M2D7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TBC1D28Q2M2D7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TBC1D28Q2M2D7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TBC1D28Q2M2D7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TBC1D28Q2M2D7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TBC1D28Q2M2D7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.73■□□□□ 0.75
TBC1D28Q2M2D7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TBC1D28Q2M2D7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TBC1D28Q2M2D7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TBC1D28Q2M2D7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TBC1D28Q2M2D7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TBC1D28Q2M2D7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TBC1D28Q2M2D7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TBC1D28Q2M2D7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TBC1D28Q2M2D7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.72■□□□□ 0.75
TBC1D28Q2M2D7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.72■□□□□ 0.75
TBC1D28Q2M2D7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TBC1D28Q2M2D7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TBC1D28Q2M2D7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TBC1D28Q2M2D7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TBC1D28Q2M2D7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.71■□□□□ 0.75
TBC1D28Q2M2D7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TBC1D28Q2M2D7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TBC1D28Q2M2D7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TBC1D28Q2M2D7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TBC1D28Q2M2D7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TBC1D28Q2M2D7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TBC1D28Q2M2D7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TBC1D28Q2M2D7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TBC1D28Q2M2D7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TBC1D28Q2M2D7 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.7■□□□□ 0.74
TBC1D28Q2M2D7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms