Protein–RNA interactions for Protein: Q12200

NCR1, NPC intracellular cholesterol transporter 1-related protein 1, yeastyeast

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NCR1Q12200 tD(GUC)G2tD(GUC)G2 72 nt8.18□□□□□ -1.1
NCR1Q12200 tD(GUC)I1tD(GUC)I1 72 nt8.18□□□□□ -1.1
NCR1Q12200 tD(GUC)I2tD(GUC)I2 72 nt8.18□□□□□ -1.1
NCR1Q12200 tD(GUC)J1tD(GUC)J1 72 nt8.18□□□□□ -1.1
NCR1Q12200 tD(GUC)J2tD(GUC)J2 72 nt8.18□□□□□ -1.1
NCR1Q12200 tD(GUC)J3tD(GUC)J3 72 nt8.18□□□□□ -1.1
NCR1Q12200 tD(GUC)J4tD(GUC)J4 72 nt8.18□□□□□ -1.1
NCR1Q12200 tD(GUC)KtD(GUC)K 72 nt8.18□□□□□ -1.1
NCR1Q12200 tD(GUC)L1tD(GUC)L1 72 nt8.18□□□□□ -1.1
NCR1Q12200 tD(GUC)L2tD(GUC)L2 72 nt8.18□□□□□ -1.1
NCR1Q12200 tD(GUC)MtD(GUC)M 72 nt8.18□□□□□ -1.1
NCR1Q12200 tD(GUC)OtD(GUC)O 72 nt8.18□□□□□ -1.1
NCR1Q12200 GRX2YDR513W 432 nt8.18□□□□□ -1.1
NCR1Q12200 AGA2YGL032C 264 nt8.18□□□□□ -1.1
NCR1Q12200 TOS8YGL096W 831 nt8.18□□□□□ -1.1
NCR1Q12200 YIL175WYIL175W 318 nt8.18□□□□□ -1.1
NCR1Q12200 YIR017W-AYIR017W-A 600 nt8.18□□□□□ -1.1
NCR1Q12200 YLR290CYLR290C 834 nt8.18□□□□□ -1.1
NCR1Q12200 CUZ1YNL155W 825 nt8.18□□□□□ -1.1
NCR1Q12200 SPS18YNL204C 903 nt8.18□□□□□ -1.1
NCR1Q12200 YNL296WYNL296W 315 nt8.18□□□□□ -1.1
NCR1Q12200 MVD1YNR043W 1191 nt8.18□□□□□ -1.1
NCR1Q12200 PEP12YOR036W 867 nt8.18□□□□□ -1.1
NCR1Q12200 DDP1YOR163W 567 nt8.18□□□□□ -1.1
NCR1Q12200 ORC6YHR118C 1308 nt8.18□□□□□ -1.1
NCR1Q12200 TIF3YPR163C 1311 nt8.18□□□□□ -1.1
NCR1Q12200 MGA1YGR249W 1371 nt8.18□□□□□ -1.1
NCR1Q12200 PUS7YOR243C 2031 nt8.17□□□□□ -1.1
NCR1Q12200 YER133W-AYER133W-A 342 nt8.17□□□□□ -1.1
NCR1Q12200 SFC1YJR095W 969 nt8.17□□□□□ -1.1
NCR1Q12200 TTI2YJR136C 1266 nt8.17□□□□□ -1.1
NCR1Q12200 HOT13YKL084W 351 nt8.17□□□□□ -1.1
NCR1Q12200 YLR339CYLR339C 552 nt8.17□□□□□ -1.1
NCR1Q12200 TEX1YNL253W 1269 nt8.17□□□□□ -1.1
NCR1Q12200 MIM1YOL026C 342 nt8.17□□□□□ -1.1
NCR1Q12200 MTC6YHR151C 1581 nt8.17□□□□□ -1.1
NCR1Q12200 TOM71YHR117W 1920 nt8.17□□□□□ -1.1
NCR1Q12200 DOS2YDR068W 933 nt8.16□□□□□ -1.1
NCR1Q12200 MSW1YDR268W 1140 nt8.16□□□□□ -1.1
NCR1Q12200 AAD10YJR155W 867 nt8.16□□□□□ -1.1
NCR1Q12200 TPO1YLL028W 1761 nt8.16□□□□□ -1.1
NCR1Q12200 YLR225CYLR225C 1224 nt8.16□□□□□ -1.1
NCR1Q12200 YNL320WYNL320W 855 nt8.16□□□□□ -1.1
NCR1Q12200 COS10YNR075W 1125 nt8.16□□□□□ -1.1
NCR1Q12200 YPQ1YOL092W 927 nt8.16□□□□□ -1.1
NCR1Q12200 MCA1YOR197W 1299 nt8.16□□□□□ -1.1
NCR1Q12200 SAM4YPL273W 978 nt8.16□□□□□ -1.1
NCR1Q12200 HBS1YKR084C 1836 nt8.15□□□□□ -1.1
NCR1Q12200 PCL8YPL219W 1479 nt8.15□□□□□ -1.1
NCR1Q12200 SLM3YDL033C 1254 nt8.15□□□□□ -1.1
NCR1Q12200 GGC1YDL198C 903 nt8.15□□□□□ -1.1
NCR1Q12200 VPS74YDR372C 1038 nt8.15□□□□□ -1.1
NCR1Q12200 YGR137WYGR137W 375 nt8.15□□□□□ -1.1
NCR1Q12200 SIC1YLR079W 855 nt8.15□□□□□ -1.1
NCR1Q12200 RPL15BYMR121C 615 nt8.15□□□□□ -1.1
NCR1Q12200 JLP2YMR132C 627 nt8.15□□□□□ -1.1
NCR1Q12200 CWC27YPL064C 906 nt8.15□□□□□ -1.1
NCR1Q12200 YBR062CYBR062C 543 nt8.15□□□□□ -1.1
NCR1Q12200 ATG14YBR128C 1035 nt8.15□□□□□ -1.1
NCR1Q12200 STB3YDR169C 1542 nt8.14□□□□□ -1.11
NCR1Q12200 DUS3YLR401C 2007 nt8.14□□□□□ -1.11
NCR1Q12200 tM(CAU)Q1tM(CAU)Q1 76 nt8.14□□□□□ -1.11
NCR1Q12200 THG1YGR024C 714 nt8.14□□□□□ -1.11
NCR1Q12200 CYS3YAL012W 1185 nt8.14□□□□□ -1.11
NCR1Q12200 TES1YJR019C 1050 nt8.14□□□□□ -1.11
NCR1Q12200 VPH2YKL119C 648 nt8.14□□□□□ -1.11
NCR1Q12200 MNN9YPL050C 1188 nt8.14□□□□□ -1.11
NCR1Q12200 GPX2YBR244W 489 nt8.14□□□□□ -1.11
NCR1Q12200 YRF1-3YGR296W 5580 nt8.14□□□□□ -1.11
NCR1Q12200 YRF1-6YNL339C 5580 nt8.14□□□□□ -1.11
NCR1Q12200 YRF1-7YPL283C 5580 nt8.14□□□□□ -1.11
NCR1Q12200 MLS1YNL117W 1665 nt8.14□□□□□ -1.11
NCR1Q12200 ATG18YFR021W 1503 nt8.13□□□□□ -1.11
NCR1Q12200 TRM13YOL125W 1431 nt8.13□□□□□ -1.11
NCR1Q12200 DUR3YHL016C 2208 nt8.13□□□□□ -1.11
NCR1Q12200 PET100YDR079W 336 nt8.13□□□□□ -1.11
NCR1Q12200 YDR149CYDR149C 708 nt8.13□□□□□ -1.11
NCR1Q12200 DOT5YIL010W 648 nt8.13□□□□□ -1.11
NCR1Q12200 YIL077CYIL077C 963 nt8.13□□□□□ -1.11
NCR1Q12200 TEM1YML064C 738 nt8.13□□□□□ -1.11
NCR1Q12200 MSI1YBR195C 1269 nt8.13□□□□□ -1.11
NCR1Q12200 SPS1YDR523C 1473 nt8.13□□□□□ -1.11
NCR1Q12200 PMT1YDL095W 2454 nt8.12□□□□□ -1.11
NCR1Q12200 ADE5,7YGL234W 2409 nt8.12□□□□□ -1.11
NCR1Q12200 YEH1YLL012W 1722 nt8.12□□□□□ -1.11
NCR1Q12200 ERG8YMR220W 1356 nt8.12□□□□□ -1.11
NCR1Q12200 HRB1YNL004W 1365 nt8.12□□□□□ -1.11
NCR1Q12200 PSA1YDL055C 1086 nt8.12□□□□□ -1.11
NCR1Q12200 AML1YGR001C 747 nt8.12□□□□□ -1.11
NCR1Q12200 QRI5YLR204W 336 nt8.12□□□□□ -1.11
NCR1Q12200 ECM19YLR390W 339 nt8.12□□□□□ -1.11
NCR1Q12200 INP54YOL065C 1155 nt8.12□□□□□ -1.11
NCR1Q12200 MBF1YOR298C-A 456 nt8.12□□□□□ -1.11
NCR1Q12200 GCD11YER025W 1584 nt8.12□□□□□ -1.11
NCR1Q12200 BSC5YNR069C 1470 nt8.12□□□□□ -1.11
NCR1Q12200 GPA1YHR005C 1419 nt8.12□□□□□ -1.11
NCR1Q12200 MCM5YLR274W 2328 nt8.11□□□□□ -1.11
NCR1Q12200 YFR032C-BYFR032C-B 264 nt8.11□□□□□ -1.11
NCR1Q12200 LSB1YGR136W 726 nt8.11□□□□□ -1.11
NCR1Q12200 YAL019W-AYAL019W-A 570 nt8.11□□□□□ -1.11
Retrieved 100 of 7,029 protein–RNA pairs in 74.1 ms