Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 ISR1YPR106W 1332 nt5.93□□□□□ -1.46
BRE1Q07457 ELP2YGR200C 2367 nt5.92□□□□□ -1.46
BRE1Q07457 YDL109CYDL109C 1944 nt5.92□□□□□ -1.46
BRE1Q07457 CTR3YLR411W 726 nt5.92□□□□□ -1.46
BRE1Q07457 PEX12YMR026C 1200 nt5.92□□□□□ -1.46
BRE1Q07457 TOM5YPR133W-A 153 nt5.92□□□□□ -1.46
BRE1Q07457 NGR1YBR212W 2019 nt5.92□□□□□ -1.46
BRE1Q07457 RPT2YDL007W 1314 nt5.92□□□□□ -1.46
BRE1Q07457 GAL4YPL248C 2646 nt5.91□□□□□ -1.46
BRE1Q07457 YDL121CYDL121C 450 nt5.91□□□□□ -1.46
BRE1Q07457 RPB4YJL140W 666 nt5.91□□□□□ -1.46
BRE1Q07457 SPG4YMR107W 348 nt5.91□□□□□ -1.46
BRE1Q07457 YGP1YNL160W 1065 nt5.91□□□□□ -1.46
BRE1Q07457 PDI1YCL043C 1569 nt5.91□□□□□ -1.46
BRE1Q07457 UBA2YDR390C 1911 nt5.9□□□□□ -1.46
BRE1Q07457 DUR1,2YBR208C 5508 nt5.9□□□□□ -1.46
BRE1Q07457 CAX4YGR036C 720 nt5.9□□□□□ -1.46
BRE1Q07457 NSG1YHR133C 876 nt5.9□□□□□ -1.46
BRE1Q07457 MRPL4YLR439W 960 nt5.9□□□□□ -1.46
BRE1Q07457 CAM1YPL048W 1248 nt5.9□□□□□ -1.46
BRE1Q07457 MRI1YPR118W 1236 nt5.9□□□□□ -1.46
BRE1Q07457 NFI1YOR156C 2181 nt5.9□□□□□ -1.47
BRE1Q07457 MAD3YJL013C 1548 nt5.89□□□□□ -1.47
BRE1Q07457 PEX19YDL065C 1029 nt5.89□□□□□ -1.47
BRE1Q07457 YHP1YDR451C 1062 nt5.89□□□□□ -1.47
BRE1Q07457 FAU1YER183C 636 nt5.89□□□□□ -1.47
BRE1Q07457 MF(ALPHA)2YGL089C 363 nt5.89□□□□□ -1.47
BRE1Q07457 VTA1YLR181C 993 nt5.89□□□□□ -1.47
BRE1Q07457 YBL029WYBL029W 1131 nt5.89□□□□□ -1.47
BRE1Q07457 YNL019CYNL019C 855 nt5.89□□□□□ -1.47
BRE1Q07457 YNL033WYNL033W 855 nt5.89□□□□□ -1.47
BRE1Q07457 LEU1YGL009C 2340 nt5.89□□□□□ -1.47
BRE1Q07457 HES1YOR237W 1305 nt5.89□□□□□ -1.47
BRE1Q07457 TFG1YGR186W 2208 nt5.89□□□□□ -1.47
BRE1Q07457 BIT2YBR270C 1638 nt5.88□□□□□ -1.47
BRE1Q07457 NRD1YNL251C 1728 nt5.88□□□□□ -1.47
BRE1Q07457 TRM8YDL201W 861 nt5.88□□□□□ -1.47
BRE1Q07457 SEM1YDR363W-A 270 nt5.88□□□□□ -1.47
BRE1Q07457 YER133W-AYER133W-A 342 nt5.88□□□□□ -1.47
BRE1Q07457 YER134CYER134C 537 nt5.88□□□□□ -1.47
BRE1Q07457 PUS6YGR169C 1215 nt5.88□□□□□ -1.47
BRE1Q07457 ETT1YOR051C 1239 nt5.88□□□□□ -1.47
BRE1Q07457 snR34snR34 203 nt5.88□□□□□ -1.47
BRE1Q07457 TUB2YFL037W 1374 nt5.88□□□□□ -1.47
BRE1Q07457 ARG4YHR018C 1392 nt5.88□□□□□ -1.47
BRE1Q07457 SLT2YHR030C 1455 nt5.88□□□□□ -1.47
BRE1Q07457 ALG2YGL065C 1512 nt5.88□□□□□ -1.47
BRE1Q07457 SEO1YAL067C 1782 nt5.88□□□□□ -1.47
BRE1Q07457 ECM32YER176W 3366 nt5.87□□□□□ -1.47
BRE1Q07457 snR57snR57 88 nt5.87□□□□□ -1.47
BRE1Q07457 GCV1YDR019C 1203 nt5.87□□□□□ -1.47
BRE1Q07457 SPC24YMR117C 642 nt5.87□□□□□ -1.47
BRE1Q07457 CKB2YOR039W 777 nt5.87□□□□□ -1.47
BRE1Q07457 ECM33YBR078W 1290 nt5.87□□□□□ -1.47
BRE1Q07457 HUL4YJR036C 2679 nt5.87□□□□□ -1.47
BRE1Q07457 GLT1YDL171C 6438 nt5.87□□□□□ -1.47
BRE1Q07457 UBP9YER098W 2265 nt5.86□□□□□ -1.47
BRE1Q07457 EXO1YOR033C 2109 nt5.86□□□□□ -1.47
BRE1Q07457 MSC7YHR039C 1935 nt5.86□□□□□ -1.47
BRE1Q07457 BRE2YLR015W 1518 nt5.86□□□□□ -1.47
BRE1Q07457 ALD3YMR169C 1521 nt5.86□□□□□ -1.47
BRE1Q07457 ALD2YMR170C 1521 nt5.86□□□□□ -1.47
BRE1Q07457 PCL9YDL179W 915 nt5.86□□□□□ -1.47
BRE1Q07457 THI5YFL058W 1023 nt5.86□□□□□ -1.47
BRE1Q07457 YGR066CYGR066C 879 nt5.86□□□□□ -1.47
BRE1Q07457 THI12YNL332W 1023 nt5.86□□□□□ -1.47
BRE1Q07457 ARR1YPR199C 885 nt5.86□□□□□ -1.47
BRE1Q07457 HIR2YOR038C 2628 nt5.86□□□□□ -1.47
BRE1Q07457 MRF1YGL143C 1242 nt5.85□□□□□ -1.47
BRE1Q07457 YNL234WYNL234W 1281 nt5.85□□□□□ -1.47
BRE1Q07457 SRB6YBR253W 366 nt5.85□□□□□ -1.47
BRE1Q07457 FRE1YLR214W 2061 nt5.85□□□□□ -1.47
BRE1Q07457 HXT7YDR342C 1713 nt5.85□□□□□ -1.47
BRE1Q07457 HXT6YDR343C 1713 nt5.85□□□□□ -1.47
BRE1Q07457 YOR1YGR281W 4434 nt5.85□□□□□ -1.47
BRE1Q07457 HXT14YNL318C 1623 nt5.85□□□□□ -1.47
BRE1Q07457 RKM2YDR198C 1440 nt5.84□□□□□ -1.47
BRE1Q07457 YDR445CYDR445C 408 nt5.84□□□□□ -1.47
BRE1Q07457 tR(ACG)JtR(ACG)J 73 nt5.84□□□□□ -1.47
BRE1Q07457 YAL044W-AYAL044W-A 333 nt5.84□□□□□ -1.47
BRE1Q07457 UIP3YAR027W 708 nt5.84□□□□□ -1.47
BRE1Q07457 YLR296WYLR296W 327 nt5.84□□□□□ -1.47
BRE1Q07457 YLR402WYLR402W 192 nt5.84□□□□□ -1.47
BRE1Q07457 HXT4YHR092C 1731 nt5.83□□□□□ -1.48
BRE1Q07457 MPH2YDL247W 1830 nt5.83□□□□□ -1.48
BRE1Q07457 MEF2YJL102W 2460 nt5.83□□□□□ -1.48
BRE1Q07457 TRE1YPL176C 2352 nt5.82□□□□□ -1.48
BRE1Q07457 MPC54YOR177C 1395 nt5.82□□□□□ -1.48
BRE1Q07457 SCS2YER120W 735 nt5.82□□□□□ -1.48
BRE1Q07457 ACT1YFL039C 1128 nt5.82□□□□□ -1.48
BRE1Q07457 MSA2YKR077W 1092 nt5.82□□□□□ -1.48
BRE1Q07457 VPS36YLR417W 1701 nt5.82□□□□□ -1.48
BRE1Q07457 INO2YDR123C 915 nt5.81□□□□□ -1.48
BRE1Q07457 SPC34YKR037C 888 nt5.81□□□□□ -1.48
BRE1Q07457 NOP13YNL175C 1212 nt5.81□□□□□ -1.48
BRE1Q07457 SFT2YBL102W 648 nt5.81□□□□□ -1.48
BRE1Q07457 ARG8YOL140W 1272 nt5.81□□□□□ -1.48
BRE1Q07457 CUE5YOR042W 1236 nt5.81□□□□□ -1.48
BRE1Q07457 GRE1YPL223C 507 nt5.81□□□□□ -1.48
BRE1Q07457 UGA2YBR006W 1494 nt5.81□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms