Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 YGR269WYGR269W 327 nt3.35□□□□□ -1.87
LSM6Q06406 YAL047W-AYAL047W-A 330 nt3.35□□□□□ -1.87
LSM6Q06406 MDG1YNL173C 1101 nt3.35□□□□□ -1.87
LSM6Q06406 YNL174WYNL174W 573 nt3.35□□□□□ -1.87
LSM6Q06406 AIM10YER087W 1731 nt3.35□□□□□ -1.87
LSM6Q06406 HXT4YHR092C 1731 nt3.35□□□□□ -1.87
LSM6Q06406 SVF1YDR346C 1446 nt3.35□□□□□ -1.87
LSM6Q06406 MIS1YBR084W 2928 nt3.34□□□□□ -1.87
LSM6Q06406 RTC5YOR118W 1704 nt3.34□□□□□ -1.87
LSM6Q06406 NSG1YHR133C 876 nt3.34□□□□□ -1.87
LSM6Q06406 FBP1YLR377C 1047 nt3.34□□□□□ -1.87
LSM6Q06406 LST8YNL006W 912 nt3.34□□□□□ -1.87
LSM6Q06406 YPL025CYPL025C 558 nt3.34□□□□□ -1.87
LSM6Q06406 PRS2YER099C 957 nt3.33□□□□□ -1.88
LSM6Q06406 TDH3YGR192C 999 nt3.33□□□□□ -1.88
LSM6Q06406 RPL43BYJR094W-A 279 nt3.33□□□□□ -1.88
LSM6Q06406 YML018CYML018C 1182 nt3.33□□□□□ -1.88
LSM6Q06406 AVO2YMR068W 1281 nt3.33□□□□□ -1.88
LSM6Q06406 YNL217WYNL217W 981 nt3.33□□□□□ -1.88
LSM6Q06406 KTR3YBR205W 1215 nt3.33□□□□□ -1.88
LSM6Q06406 YBR230W-AYBR230W-A 201 nt3.33□□□□□ -1.88
LSM6Q06406 MEC3YLR288C 1425 nt3.33□□□□□ -1.88
LSM6Q06406 YEF1YEL041W 1488 nt3.33□□□□□ -1.88
LSM6Q06406 SYP1YCR030C 2613 nt3.33□□□□□ -1.88
LSM6Q06406 PHO8YDR481C 1701 nt3.33□□□□□ -1.88
LSM6Q06406 RPS11AYDR025W 471 nt3.32□□□□□ -1.88
LSM6Q06406 ORC6YHR118C 1308 nt3.32□□□□□ -1.88
LSM6Q06406 RTT106YNL206C 1368 nt3.32□□□□□ -1.88
LSM6Q06406 YLR152CYLR152C 1731 nt3.32□□□□□ -1.88
LSM6Q06406 YSH1YLR277C 2340 nt3.31□□□□□ -1.88
LSM6Q06406 NOC2YOR206W 2133 nt3.31□□□□□ -1.88
LSM6Q06406 MDM30YLR368W 1797 nt3.31□□□□□ -1.88
LSM6Q06406 ZPR1YGR211W 1461 nt3.31□□□□□ -1.88
LSM6Q06406 PRE3YJL001W 648 nt3.31□□□□□ -1.88
LSM6Q06406 SPO7YAL009W 780 nt3.31□□□□□ -1.88
LSM6Q06406 SUM1YDR310C 3189 nt3.31□□□□□ -1.88
LSM6Q06406 FRE7YOL152W 1863 nt3.3□□□□□ -1.88
LSM6Q06406 KGD1YIL125W 3045 nt3.3□□□□□ -1.88
LSM6Q06406 MCM4YPR019W 2802 nt3.3□□□□□ -1.88
LSM6Q06406 ECM22YLR228C 2445 nt3.3□□□□□ -1.88
LSM6Q06406 RIA1YNL163C 3333 nt3.3□□□□□ -1.88
LSM6Q06406 snR7-LsnR7-L 214 nt3.3□□□□□ -1.88
LSM6Q06406 BNA6YFR047C 888 nt3.3□□□□□ -1.88
LSM6Q06406 YGR035W-AYGR035W-A 222 nt3.3□□□□□ -1.88
LSM6Q06406 RPL8AYHL033C 771 nt3.3□□□□□ -1.88
LSM6Q06406 YHR127WYHR127W 732 nt3.3□□□□□ -1.88
LSM6Q06406 NPT1YOR209C 1290 nt3.3□□□□□ -1.88
LSM6Q06406 NAT5YOR253W 531 nt3.3□□□□□ -1.88
LSM6Q06406 RRP3YHR065C 1506 nt3.29□□□□□ -1.88
LSM6Q06406 RPO31YOR116C 4383 nt3.29□□□□□ -1.88
LSM6Q06406 YAP1YML007W 1953 nt3.29□□□□□ -1.88
LSM6Q06406 TRF5YNL299W 1929 nt3.29□□□□□ -1.88
LSM6Q06406 RPG1YBR079C 2895 nt3.29□□□□□ -1.88
LSM6Q06406 RNA15YGL044C 891 nt3.29□□□□□ -1.88
LSM6Q06406 YGR122WYGR122W 1209 nt3.29□□□□□ -1.88
LSM6Q06406 PRE9YGR135W 777 nt3.29□□□□□ -1.88
LSM6Q06406 YAR030CYAR030C 342 nt3.29□□□□□ -1.88
LSM6Q06406 YLR157W-EYLR157W-E 165 nt3.29□□□□□ -1.88
LSM6Q06406 MAP1YLR244C 1164 nt3.29□□□□□ -1.88
LSM6Q06406 PDX3YBR035C 687 nt3.29□□□□□ -1.88
LSM6Q06406 ENV7YPL236C 1095 nt3.29□□□□□ -1.88
LSM6Q06406 CDC14YFR028C 1656 nt3.29□□□□□ -1.88
LSM6Q06406 DBP3YGL078C 1572 nt3.29□□□□□ -1.88
LSM6Q06406 SRO7YPR032W 3102 nt3.28□□□□□ -1.88
LSM6Q06406 THI7YLR237W 1797 nt3.28□□□□□ -1.88
LSM6Q06406 HOS3YPL116W 2094 nt3.28□□□□□ -1.88
LSM6Q06406 YDR056CYDR056C 618 nt3.28□□□□□ -1.88
LSM6Q06406 IPK1YDR315C 846 nt3.28□□□□□ -1.88
LSM6Q06406 DCD1YHR144C 939 nt3.28□□□□□ -1.88
LSM6Q06406 YLR374CYLR374C 390 nt3.28□□□□□ -1.88
LSM6Q06406 YBL006W-AYBL006W-A 150 nt3.28□□□□□ -1.88
LSM6Q06406 YNL134CYNL134C 1131 nt3.28□□□□□ -1.88
LSM6Q06406 DAL82YNL314W 768 nt3.28□□□□□ -1.88
LSM6Q06406 SUA7YPR086W 1038 nt3.28□□□□□ -1.88
LSM6Q06406 RAD30YDR419W 1899 nt3.28□□□□□ -1.88
LSM6Q06406 YND1YER005W 1893 nt3.28□□□□□ -1.88
LSM6Q06406 NOP7YGR103W 1818 nt3.28□□□□□ -1.88
LSM6Q06406 YPL277CYPL277C 1464 nt3.28□□□□□ -1.88
LSM6Q06406 SMF1YOL122C 1728 nt3.27□□□□□ -1.89
LSM6Q06406 SBE2YDR351W 2595 nt3.27□□□□□ -1.89
LSM6Q06406 PIM1YBL022C 3402 nt3.27□□□□□ -1.89
LSM6Q06406 YCF1YDR135C 4548 nt3.27□□□□□ -1.89
LSM6Q06406 HOM3YER052C 1584 nt3.27□□□□□ -1.89
LSM6Q06406 RAM1YDL090C 1296 nt3.27□□□□□ -1.89
LSM6Q06406 IPI1YHR085W 1005 nt3.27□□□□□ -1.89
LSM6Q06406 NMD4YLR363C 657 nt3.27□□□□□ -1.89
LSM6Q06406 CSL4YNL232W 879 nt3.27□□□□□ -1.89
LSM6Q06406 MRL1YPR079W 1146 nt3.27□□□□□ -1.89
LSM6Q06406 NNK1YKL171W 2787 nt3.27□□□□□ -1.89
LSM6Q06406 VID30YGL227W 2877 nt3.26□□□□□ -1.89
LSM6Q06406 SWC3YAL011W 1878 nt3.26□□□□□ -1.89
LSM6Q06406 ECM7YLR443W 1347 nt3.26□□□□□ -1.89
LSM6Q06406 VMA1YDL185W 3216 nt3.26□□□□□ -1.89
LSM6Q06406 HSP42YDR171W 1128 nt3.26□□□□□ -1.89
LSM6Q06406 DCV1YFR012W 609 nt3.26□□□□□ -1.89
LSM6Q06406 JJJ3YJR097W 519 nt3.26□□□□□ -1.89
LSM6Q06406 YJR115WYJR115W 510 nt3.26□□□□□ -1.89
LSM6Q06406 YLR126CYLR126C 756 nt3.26□□□□□ -1.89
LSM6Q06406 YMR030W-AYMR030W-A 291 nt3.26□□□□□ -1.89
LSM6Q06406 IMD2YHR216W 1572 nt3.25□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms