Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN12P56749 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN12P56749 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CLDN12P56749 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN12P56749 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN12P56749 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN12P56749 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN12P56749 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN12P56749 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CLDN12P56749 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CLDN12P56749 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN12P56749 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN12P56749 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLDN12P56749 AC007029.1-201ENST00000604183 313 ntBASIC19.76■□□□□ 0.75
CLDN12P56749 AC022413.1-201ENST00000624602 984 ntBASIC19.76■□□□□ 0.75
CLDN12P56749 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN12P56749 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CLDN12P56749 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN12P56749 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN12P56749 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN12P56749 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN12P56749 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN12P56749 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN12P56749 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN12P56749 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.75■□□□□ 0.75
CLDN12P56749 RAP2CP1-202ENST00000605179 643 ntBASIC19.75■□□□□ 0.75
CLDN12P56749 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN12P56749 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN12P56749 GUSBP5-202ENST00000510805 1989 ntBASIC19.75■□□□□ 0.75
CLDN12P56749 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN12P56749 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN12P56749 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN12P56749 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN12P56749 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN12P56749 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CLDN12P56749 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN12P56749 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN12P56749 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN12P56749 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN12P56749 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN12P56749 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN12P56749 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN12P56749 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN12P56749 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN12P56749 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN12P56749 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CLDN12P56749 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN12P56749 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN12P56749 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN12P56749 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN12P56749 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN12P56749 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN12P56749 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN12P56749 KRT18P10-201ENST00000388836 1287 ntBASIC19.73■□□□□ 0.75
CLDN12P56749 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN12P56749 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN12P56749 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN12P56749 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
CLDN12P56749 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN12P56749 LINC00526-201ENST00000581067 1875 ntBASIC19.73■□□□□ 0.75
CLDN12P56749 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN12P56749 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN12P56749 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN12P56749 AC026202.3-201ENST00000600805 1127 ntBASIC19.72■□□□□ 0.75
CLDN12P56749 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN12P56749 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN12P56749 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN12P56749 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN12P56749 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN12P56749 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN12P56749 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.71■□□□□ 0.75
CLDN12P56749 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CLDN12P56749 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLDN12P56749 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN12P56749 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN12P56749 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN12P56749 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN12P56749 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN12P56749 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
CLDN12P56749 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN12P56749 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN12P56749 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN12P56749 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CLDN12P56749 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.7■□□□□ 0.74
CLDN12P56749 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CLDN12P56749 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN12P56749 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CLDN12P56749 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN12P56749 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN12P56749 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.69■□□□□ 0.74
CLDN12P56749 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.69■□□□□ 0.74
CLDN12P56749 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.69■□□□□ 0.74
CLDN12P56749 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.69■□□□□ 0.74
CLDN12P56749 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN12P56749 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN12P56749 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN12P56749 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN12P56749 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN12P56749 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN12P56749 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms