Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXG1P55316 ALDH1A3-203ENST00000557963 1670 ntBASIC20.07■□□□□ 0.8
FOXG1P55316 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXG1P55316 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXG1P55316 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.06■□□□□ 0.8
FOXG1P55316 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.06■□□□□ 0.8
FOXG1P55316 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXG1P55316 ABCB10P4-201ENST00000566803 2184 ntBASIC20.06■□□□□ 0.8
FOXG1P55316 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXG1P55316 AC141586.4-201ENST00000624558 1573 ntBASIC20.06■□□□□ 0.8
FOXG1P55316 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
FOXG1P55316 AC005703.6-201ENST00000623265 1329 ntBASIC20.05■□□□□ 0.8
FOXG1P55316 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
FOXG1P55316 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXG1P55316 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXG1P55316 AC131281.2-201ENST00000520478 145 ntBASIC20.05■□□□□ 0.8
FOXG1P55316 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.05■□□□□ 0.8
FOXG1P55316 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXG1P55316 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
FOXG1P55316 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXG1P55316 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
FOXG1P55316 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.05■□□□□ 0.8
FOXG1P55316 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXG1P55316 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
FOXG1P55316 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXG1P55316 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXG1P55316 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.04■□□□□ 0.8
FOXG1P55316 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXG1P55316 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXG1P55316 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXG1P55316 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.04■□□□□ 0.8
FOXG1P55316 AL356740.2-201ENST00000601559 647 ntBASIC20.04■□□□□ 0.8
FOXG1P55316 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.04■□□□□ 0.8
FOXG1P55316 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXG1P55316 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXG1P55316 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXG1P55316 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXG1P55316 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXG1P55316 AL512631.2-201ENST00000604634 923 ntBASIC20.03■□□□□ 0.8
FOXG1P55316 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.03■□□□□ 0.8
FOXG1P55316 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXG1P55316 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.03■□□□□ 0.8
FOXG1P55316 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.03■□□□□ 0.8
FOXG1P55316 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.03■□□□□ 0.8
FOXG1P55316 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXG1P55316 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXG1P55316 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.02■□□□□ 0.8
FOXG1P55316 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXG1P55316 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXG1P55316 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.02■□□□□ 0.8
FOXG1P55316 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.02■□□□□ 0.8
FOXG1P55316 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
FOXG1P55316 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
FOXG1P55316 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
FOXG1P55316 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
FOXG1P55316 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.01■□□□□ 0.79
FOXG1P55316 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXG1P55316 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXG1P55316 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXG1P55316 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
FOXG1P55316 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
FOXG1P55316 MIR4466-201ENST00000606121 54 ntBASIC20.01■□□□□ 0.79
FOXG1P55316 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXG1P55316 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXG1P55316 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXG1P55316 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXG1P55316 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXG1P55316 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXG1P55316 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXG1P55316 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXG1P55316 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
FOXG1P55316 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
FOXG1P55316 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
FOXG1P55316 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
FOXG1P55316 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXG1P55316 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20■□□□□ 0.79
FOXG1P55316 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20■□□□□ 0.79
FOXG1P55316 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20■□□□□ 0.79
FOXG1P55316 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20■□□□□ 0.79
FOXG1P55316 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
FOXG1P55316 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXG1P55316 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXG1P55316 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXG1P55316 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXG1P55316 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXG1P55316 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FOXG1P55316 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FOXG1P55316 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXG1P55316 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FOXG1P55316 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXG1P55316 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXG1P55316 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FOXG1P55316 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXG1P55316 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXG1P55316 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.98■□□□□ 0.79
FOXG1P55316 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXG1P55316 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXG1P55316 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXG1P55316 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXG1P55316 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms