Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
LBX1P52954 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
LBX1P52954 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LBX1P52954 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
LBX1P52954 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC26.45■■□□□ 1.82
LBX1P52954 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26.45■■□□□ 1.82
LBX1P52954 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LBX1P52954 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
LBX1P52954 DBI-210ENST00000542275 757 ntTSL 5 BASIC26.44■■□□□ 1.82
LBX1P52954 AC087239.1-201ENST00000622671 572 ntBASIC26.44■■□□□ 1.82
LBX1P52954 GAMT-205ENST00000640762 751 ntTSL 5 BASIC26.44■■□□□ 1.82
LBX1P52954 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
LBX1P52954 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
LBX1P52954 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
LBX1P52954 MIR663A-201ENST00000385250 93 ntBASIC26.43■■□□□ 1.82
LBX1P52954 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
LBX1P52954 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.43■■□□□ 1.82
LBX1P52954 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
LBX1P52954 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
LBX1P52954 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
LBX1P52954 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC26.42■■□□□ 1.82
LBX1P52954 AP005435.1-201ENST00000529293 1178 ntBASIC26.42■■□□□ 1.82
LBX1P52954 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.42■■□□□ 1.82
LBX1P52954 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
LBX1P52954 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC26.42■■□□□ 1.82
LBX1P52954 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
LBX1P52954 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
LBX1P52954 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
LBX1P52954 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.41■■□□□ 1.82
LBX1P52954 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
LBX1P52954 CBFB-203ENST00000561924 584 ntTSL 5 BASIC26.41■■□□□ 1.82
LBX1P52954 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC26.41■■□□□ 1.82
LBX1P52954 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26.41■■□□□ 1.82
LBX1P52954 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.41■■□□□ 1.82
LBX1P52954 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.41■■□□□ 1.82
LBX1P52954 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
LBX1P52954 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
LBX1P52954 KLF13-207ENST00000560473 489 ntTSL 3 BASIC26.4■■□□□ 1.82
LBX1P52954 GALNS-213ENST00000569433 723 ntTSL 3 BASIC26.4■■□□□ 1.82
LBX1P52954 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
LBX1P52954 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
LBX1P52954 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
LBX1P52954 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.4■■□□□ 1.82
LBX1P52954 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
LBX1P52954 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
LBX1P52954 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
LBX1P52954 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
LBX1P52954 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC26.39■■□□□ 1.82
LBX1P52954 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
LBX1P52954 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC26.39■■□□□ 1.82
LBX1P52954 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
LBX1P52954 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LBX1P52954 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.38■■□□□ 1.81
LBX1P52954 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
LBX1P52954 AC142472.1-201ENST00000612013 1741 ntBASIC26.38■■□□□ 1.81
LBX1P52954 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
LBX1P52954 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
LBX1P52954 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.38■■□□□ 1.81
LBX1P52954 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
LBX1P52954 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
LBX1P52954 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
LBX1P52954 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
LBX1P52954 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
LBX1P52954 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
LBX1P52954 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
LBX1P52954 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC26.36■■□□□ 1.81
LBX1P52954 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC26.36■■□□□ 1.81
LBX1P52954 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
LBX1P52954 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC26.36■■□□□ 1.81
LBX1P52954 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
LBX1P52954 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.36■■□□□ 1.81
LBX1P52954 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.36■■□□□ 1.81
LBX1P52954 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.36■■□□□ 1.81
LBX1P52954 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LBX1P52954 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LBX1P52954 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
LBX1P52954 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LBX1P52954 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
LBX1P52954 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC26.35■■□□□ 1.81
LBX1P52954 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.35■■□□□ 1.81
LBX1P52954 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
LBX1P52954 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
LBX1P52954 METTL26-203ENST00000397664 604 ntTSL 2 BASIC26.34■■□□□ 1.81
LBX1P52954 pRNA.6-201ENST00000610482 90 ntBASIC26.34■■□□□ 1.81
LBX1P52954 pRNA.5-201ENST00000612139 90 ntBASIC26.34■■□□□ 1.81
LBX1P52954 pRNA.11-201ENST00000618423 90 ntBASIC26.34■■□□□ 1.81
LBX1P52954 pRNA.13-201ENST00000619112 90 ntBASIC26.34■■□□□ 1.81
LBX1P52954 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
LBX1P52954 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
LBX1P52954 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
LBX1P52954 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
LBX1P52954 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC26.33■■□□□ 1.81
LBX1P52954 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
LBX1P52954 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.32■■□□□ 1.8
LBX1P52954 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC26.32■■□□□ 1.8
LBX1P52954 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC26.32■■□□□ 1.8
LBX1P52954 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
LBX1P52954 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.32■■□□□ 1.8
LBX1P52954 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.32■■□□□ 1.8
LBX1P52954 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms