Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.56■■□□□ 1.04
PRIM2P49643 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.56■■□□□ 1.04
PRIM2P49643 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PRIM2P49643 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.56■■□□□ 1.04
PRIM2P49643 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PRIM2P49643 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRIM2P49643 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRIM2P49643 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PRIM2P49643 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRIM2P49643 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.55■■□□□ 1.04
PRIM2P49643 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.55■■□□□ 1.04
PRIM2P49643 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.55■■□□□ 1.04
PRIM2P49643 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.55■■□□□ 1.04
PRIM2P49643 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRIM2P49643 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.55■■□□□ 1.04
PRIM2P49643 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRIM2P49643 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRIM2P49643 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRIM2P49643 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRIM2P49643 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PRIM2P49643 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRIM2P49643 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PRIM2P49643 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PRIM2P49643 AL161729.1-201ENST00000604104 1402 ntBASIC21.54■■□□□ 1.04
PRIM2P49643 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRIM2P49643 AC079834.2-201ENST00000609776 1949 ntBASIC21.53■■□□□ 1.04
PRIM2P49643 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRIM2P49643 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PRIM2P49643 AC120024.1-201ENST00000562672 995 ntBASIC21.53■■□□□ 1.04
PRIM2P49643 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PRIM2P49643 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PRIM2P49643 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.53■■□□□ 1.04
PRIM2P49643 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRIM2P49643 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PRIM2P49643 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PRIM2P49643 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PRIM2P49643 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.52■■□□□ 1.04
PRIM2P49643 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PRIM2P49643 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PRIM2P49643 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.52■■□□□ 1.04
PRIM2P49643 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PRIM2P49643 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PRIM2P49643 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.52■■□□□ 1.04
PRIM2P49643 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PRIM2P49643 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PRIM2P49643 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PRIM2P49643 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.52■■□□□ 1.03
PRIM2P49643 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRIM2P49643 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRIM2P49643 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.51■■□□□ 1.03
PRIM2P49643 KRT18P24-201ENST00000344739 1156 ntBASIC21.51■■□□□ 1.03
PRIM2P49643 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PRIM2P49643 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.51■■□□□ 1.03
PRIM2P49643 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.51■■□□□ 1.03
PRIM2P49643 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRIM2P49643 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRIM2P49643 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PRIM2P49643 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.51■■□□□ 1.03
PRIM2P49643 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PRIM2P49643 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PRIM2P49643 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PRIM2P49643 MIR4508-201ENST00000584178 70 ntBASIC21.5■■□□□ 1.03
PRIM2P49643 THA1P-201ENST00000590384 1145 ntBASIC21.5■■□□□ 1.03
PRIM2P49643 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PRIM2P49643 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.5■■□□□ 1.03
PRIM2P49643 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PRIM2P49643 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRIM2P49643 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PRIM2P49643 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRIM2P49643 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.49■■□□□ 1.03
PRIM2P49643 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRIM2P49643 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRIM2P49643 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.49■■□□□ 1.03
PRIM2P49643 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.49■■□□□ 1.03
PRIM2P49643 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.49■■□□□ 1.03
PRIM2P49643 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.49■■□□□ 1.03
PRIM2P49643 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.49■■□□□ 1.03
PRIM2P49643 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRIM2P49643 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRIM2P49643 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRIM2P49643 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PRIM2P49643 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.49■■□□□ 1.03
PRIM2P49643 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PRIM2P49643 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.48■■□□□ 1.03
PRIM2P49643 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.48■■□□□ 1.03
PRIM2P49643 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.48■■□□□ 1.03
PRIM2P49643 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRIM2P49643 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRIM2P49643 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PRIM2P49643 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PRIM2P49643 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PRIM2P49643 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PRIM2P49643 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRIM2P49643 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PRIM2P49643 AL022069.1-201ENST00000568025 1636 ntBASIC21.47■■□□□ 1.03
PRIM2P49643 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PRIM2P49643 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PRIM2P49643 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PRIM2P49643 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRIM2P49643 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms