Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 UMP1YBR173C 447 nt3.62□□□□□ -1.83
VPS55P47111 GAL4YPL248C 2646 nt3.62□□□□□ -1.83
VPS55P47111 CLA4YNL298W 2529 nt3.62□□□□□ -1.83
VPS55P47111 TRM44YPL030W 1704 nt3.61□□□□□ -1.83
VPS55P47111 SPR6YER115C 576 nt3.61□□□□□ -1.83
VPS55P47111 PUS5YLR165C 765 nt3.61□□□□□ -1.83
VPS55P47111 CCS1YMR038C 750 nt3.61□□□□□ -1.83
VPS55P47111 MAP2YBL091C 1266 nt3.61□□□□□ -1.83
VPS55P47111 SAF1YBR280C 1914 nt3.61□□□□□ -1.83
VPS55P47111 NOP58YOR310C 1536 nt3.6□□□□□ -1.83
VPS55P47111 MPS3YJL019W 2049 nt3.6□□□□□ -1.83
VPS55P47111 GDE1YPL110C 3672 nt3.6□□□□□ -1.83
VPS55P47111 CTT1YGR088W 1689 nt3.6□□□□□ -1.83
VPS55P47111 NMA1YLR328W 1206 nt3.6□□□□□ -1.83
VPS55P47111 OAZ1YPL052W 879 nt3.6□□□□□ -1.83
VPS55P47111 CBP3YPL215W 1008 nt3.6□□□□□ -1.83
VPS55P47111 VHS2YIL135C 1311 nt3.6□□□□□ -1.83
VPS55P47111 CBF5YLR175W 1452 nt3.6□□□□□ -1.83
VPS55P47111 KGD1YIL125W 3045 nt3.6□□□□□ -1.83
VPS55P47111 SSB2YNL209W 1842 nt3.59□□□□□ -1.83
VPS55P47111 CPR4YCR069W 957 nt3.59□□□□□ -1.83
VPS55P47111 YGR066CYGR066C 879 nt3.59□□□□□ -1.83
VPS55P47111 FMP33YJL161W 543 nt3.59□□□□□ -1.83
VPS55P47111 RTC1YOL138C 4026 nt3.59□□□□□ -1.83
VPS55P47111 TDA6YPR157W 1404 nt3.59□□□□□ -1.84
VPS55P47111 FDC1YDR539W 1512 nt3.59□□□□□ -1.84
VPS55P47111 SAP4YGL229C 2457 nt3.59□□□□□ -1.84
VPS55P47111 FAA4YMR246W 2085 nt3.58□□□□□ -1.84
VPS55P47111 ABF1YKL112W 2196 nt3.58□□□□□ -1.84
VPS55P47111 CIA2YHR122W 696 nt3.58□□□□□ -1.84
VPS55P47111 YNL134CYNL134C 1131 nt3.58□□□□□ -1.84
VPS55P47111 YGP1YNL160W 1065 nt3.58□□□□□ -1.84
VPS55P47111 GIP2YER054C 1647 nt3.58□□□□□ -1.84
VPS55P47111 MET7YOR241W 1647 nt3.58□□□□□ -1.84
VPS55P47111 TSL1YML100W 3297 nt3.58□□□□□ -1.84
VPS55P47111 RTC5YOR118W 1704 nt3.58□□□□□ -1.84
VPS55P47111 RCK2YLR248W 1833 nt3.58□□□□□ -1.84
VPS55P47111 MPH2YDL247W 1830 nt3.57□□□□□ -1.84
VPS55P47111 APL6YGR261C 2430 nt3.57□□□□□ -1.84
VPS55P47111 OPT1YJL212C 2400 nt3.57□□□□□ -1.84
VPS55P47111 YIM1YMR152W 1098 nt3.57□□□□□ -1.84
VPS55P47111 ALD3YMR169C 1521 nt3.57□□□□□ -1.84
VPS55P47111 ALD2YMR170C 1521 nt3.57□□□□□ -1.84
VPS55P47111 URE2YNL229C 1065 nt3.57□□□□□ -1.84
VPS55P47111 ALG6YOR002W 1635 nt3.57□□□□□ -1.84
VPS55P47111 CIN5YOR028C 888 nt3.57□□□□□ -1.84
VPS55P47111 RGS2YOR107W 930 nt3.57□□□□□ -1.84
VPS55P47111 TAF5YBR198C 2397 nt3.57□□□□□ -1.84
VPS55P47111 HRK1YOR267C 2280 nt3.56□□□□□ -1.84
VPS55P47111 ARN1YHL040C 1884 nt3.56□□□□□ -1.84
VPS55P47111 SSB1YDL229W 1842 nt3.56□□□□□ -1.84
VPS55P47111 RAD28YDR030C 1521 nt3.56□□□□□ -1.84
VPS55P47111 YPL245WYPL245W 1365 nt3.56□□□□□ -1.84
VPS55P47111 YDL012CYDL012C 324 nt3.56□□□□□ -1.84
VPS55P47111 SNA2YDR525W-A 240 nt3.56□□□□□ -1.84
VPS55P47111 YJL215CYJL215C 360 nt3.56□□□□□ -1.84
VPS55P47111 YJR012CYJR012C 624 nt3.56□□□□□ -1.84
VPS55P47111 SEC18YBR080C 2277 nt3.56□□□□□ -1.84
VPS55P47111 GAD1YMR250W 1758 nt3.56□□□□□ -1.84
VPS55P47111 LYS2YBR115C 4179 nt3.55□□□□□ -1.84
VPS55P47111 YEH2YLR020C 1617 nt3.55□□□□□ -1.84
VPS55P47111 ERG4YGL012W 1422 nt3.55□□□□□ -1.84
VPS55P47111 MDM34YGL219C 1380 nt3.55□□□□□ -1.84
VPS55P47111 ARG82YDR173C 1068 nt3.55□□□□□ -1.84
VPS55P47111 SUR2YDR297W 1050 nt3.55□□□□□ -1.84
VPS55P47111 YHL034W-AYHL034W-A 462 nt3.55□□□□□ -1.84
VPS55P47111 DCD1YHR144C 939 nt3.55□□□□□ -1.84
VPS55P47111 UBI4YLL039C 1146 nt3.55□□□□□ -1.84
VPS55P47111 ECM23YPL021W 564 nt3.55□□□□□ -1.84
VPS55P47111 AVO1YOL078W 3531 nt3.54□□□□□ -1.84
VPS55P47111 KIC1YHR102W 3243 nt3.54□□□□□ -1.84
VPS55P47111 YMR111CYMR111C 1389 nt3.54□□□□□ -1.84
VPS55P47111 SKG6YHR149C 2205 nt3.54□□□□□ -1.84
VPS55P47111 DEF1YKL054C 2217 nt3.54□□□□□ -1.84
VPS55P47111 SKG3YLR187W 3081 nt3.54□□□□□ -1.84
VPS55P47111 HNT2YDR305C 654 nt3.54□□□□□ -1.84
VPS55P47111 tS(AGA)D3tS(AGA)D3 83 nt3.54□□□□□ -1.84
VPS55P47111 COA3YJL062W-A 258 nt3.54□□□□□ -1.84
VPS55P47111 DBR1YKL149C 1218 nt3.54□□□□□ -1.84
VPS55P47111 YOR342CYOR342C 960 nt3.54□□□□□ -1.84
VPS55P47111 YPR071WYPR071W 636 nt3.54□□□□□ -1.84
VPS55P47111 REI1YBR267W 1182 nt3.54□□□□□ -1.84
VPS55P47111 HPC2YBR215W 1878 nt3.54□□□□□ -1.84
VPS55P47111 URA3YEL021W 804 nt3.53□□□□□ -1.84
VPS55P47111 PDE1YGL248W 1110 nt3.53□□□□□ -1.84
VPS55P47111 YIL165CYIL165C 360 nt3.53□□□□□ -1.84
VPS55P47111 PCL1YNL289W 840 nt3.53□□□□□ -1.84
VPS55P47111 SAC1YKL212W 1872 nt3.53□□□□□ -1.84
VPS55P47111 NMD3YHR170W 1557 nt3.52□□□□□ -1.85
VPS55P47111 BCP1YDR361C 852 nt3.52□□□□□ -1.85
VPS55P47111 YER145C-AYER145C-A 438 nt3.52□□□□□ -1.85
VPS55P47111 DAM1YGR113W 1032 nt3.52□□□□□ -1.85
VPS55P47111 YHR214WYHR214W 612 nt3.52□□□□□ -1.85
VPS55P47111 LSO1YJR005C-A 282 nt3.52□□□□□ -1.85
VPS55P47111 YAR066WYAR066W 612 nt3.52□□□□□ -1.85
VPS55P47111 YLR346CYLR346C 306 nt3.52□□□□□ -1.85
VPS55P47111 YLR364C-AYLR364C-A 123 nt3.52□□□□□ -1.85
VPS55P47111 SPS19YNL202W 879 nt3.52□□□□□ -1.85
VPS55P47111 MDM12YOL009C 816 nt3.52□□□□□ -1.85
VPS55P47111 PEP4YPL154C 1218 nt3.52□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms