Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 tK(CUU)G1tK(CUU)G1 73 nt4.32□□□□□ -1.72
LSM1P47017 tK(CUU)G2tK(CUU)G2 73 nt4.32□□□□□ -1.72
LSM1P47017 tK(CUU)G3tK(CUU)G3 73 nt4.32□□□□□ -1.72
LSM1P47017 tK(CUU)ItK(CUU)I 73 nt4.32□□□□□ -1.72
LSM1P47017 tK(CUU)JtK(CUU)J 73 nt4.32□□□□□ -1.72
LSM1P47017 tK(CUU)KtK(CUU)K 73 nt4.32□□□□□ -1.72
LSM1P47017 tK(CUU)MtK(CUU)M 73 nt4.32□□□□□ -1.72
LSM1P47017 tK(CUU)PtK(CUU)P 73 nt4.32□□□□□ -1.72
LSM1P47017 DCV1YFR012W 609 nt4.32□□□□□ -1.72
LSM1P47017 TDA5YLR426W 981 nt4.32□□□□□ -1.72
LSM1P47017 GPI12YMR281W 915 nt4.32□□□□□ -1.72
LSM1P47017 ARG1YOL058W 1263 nt4.32□□□□□ -1.72
LSM1P47017 GMC1YDR506C 1827 nt4.32□□□□□ -1.72
LSM1P47017 OLE1YGL055W 1533 nt4.31□□□□□ -1.72
LSM1P47017 THI5YFL058W 1023 nt4.31□□□□□ -1.72
LSM1P47017 TDH3YGR192C 999 nt4.31□□□□□ -1.72
LSM1P47017 MRP17YKL003C 396 nt4.31□□□□□ -1.72
LSM1P47017 ROT1YMR200W 771 nt4.31□□□□□ -1.72
LSM1P47017 THI12YNL332W 1023 nt4.31□□□□□ -1.72
LSM1P47017 VID30YGL227W 2877 nt4.31□□□□□ -1.72
LSM1P47017 YND1YER005W 1893 nt4.3□□□□□ -1.72
LSM1P47017 UBP7YIL156W 3216 nt4.3□□□□□ -1.72
LSM1P47017 STE12YHR084W 2067 nt4.3□□□□□ -1.72
LSM1P47017 BBC1YJL020C 3474 nt4.3□□□□□ -1.72
LSM1P47017 YDL119CYDL119C 924 nt4.3□□□□□ -1.72
LSM1P47017 SNF11YDR073W 510 nt4.3□□□□□ -1.72
LSM1P47017 IPI1YHR085W 1005 nt4.3□□□□□ -1.72
LSM1P47017 FAF1YIL019W 1041 nt4.3□□□□□ -1.72
LSM1P47017 RPB4YJL140W 666 nt4.3□□□□□ -1.72
LSM1P47017 DCN1YLR128W 810 nt4.3□□□□□ -1.72
LSM1P47017 NOB1YOR056C 1380 nt4.29□□□□□ -1.72
LSM1P47017 YGL036WYGL036W 2730 nt4.29□□□□□ -1.72
LSM1P47017 YHR127WYHR127W 732 nt4.29□□□□□ -1.72
LSM1P47017 YMR082CYMR082C 357 nt4.29□□□□□ -1.72
LSM1P47017 TRS33YOR115C 807 nt4.29□□□□□ -1.72
LSM1P47017 MAK3YPR051W 531 nt4.29□□□□□ -1.72
LSM1P47017 YCL022CYCL022C 516 nt4.29□□□□□ -1.72
LSM1P47017 KIC1YHR102W 3243 nt4.29□□□□□ -1.72
LSM1P47017 SKM1YOL113W 1968 nt4.28□□□□□ -1.72
LSM1P47017 PDR5YOR153W 4536 nt4.28□□□□□ -1.72
LSM1P47017 YMR315WYMR315W 1050 nt4.28□□□□□ -1.72
LSM1P47017 YPL102CYPL102C 303 nt4.28□□□□□ -1.72
LSM1P47017 ECM32YER176W 3366 nt4.28□□□□□ -1.72
LSM1P47017 FRS1YLR060W 1788 nt4.27□□□□□ -1.73
LSM1P47017 ULS1YOR191W 4860 nt4.27□□□□□ -1.73
LSM1P47017 YJL068CYJL068C 900 nt4.27□□□□□ -1.73
LSM1P47017 POM33YLL023C 840 nt4.27□□□□□ -1.73
LSM1P47017 CUZ1YNL155W 825 nt4.27□□□□□ -1.73
LSM1P47017 DCS2YOR173W 1062 nt4.27□□□□□ -1.73
LSM1P47017 RMI1YPL024W 726 nt4.27□□□□□ -1.73
LSM1P47017 UIP4YPL186C 915 nt4.27□□□□□ -1.73
LSM1P47017 ARC40YBR234C 1155 nt4.27□□□□□ -1.73
LSM1P47017 NUP2YLR335W 2163 nt4.27□□□□□ -1.73
LSM1P47017 YOL153CYOL153C 1746 nt4.26□□□□□ -1.73
LSM1P47017 GSY1YFR015C 2127 nt4.26□□□□□ -1.73
LSM1P47017 RFU1YLR073C 603 nt4.26□□□□□ -1.73
LSM1P47017 ORM2YLR350W 651 nt4.26□□□□□ -1.73
LSM1P47017 YNL194CYNL194C 906 nt4.26□□□□□ -1.73
LSM1P47017 TRM10YOL093W 882 nt4.26□□□□□ -1.73
LSM1P47017 NCE102YPR149W 522 nt4.26□□□□□ -1.73
LSM1P47017 TEA1YOR337W 2280 nt4.25□□□□□ -1.73
LSM1P47017 RIP1YEL024W 648 nt4.25□□□□□ -1.73
LSM1P47017 NUG1YER006W 1563 nt4.25□□□□□ -1.73
LSM1P47017 SEH1YGL100W 1050 nt4.25□□□□□ -1.73
LSM1P47017 YGR035W-AYGR035W-A 222 nt4.25□□□□□ -1.73
LSM1P47017 KRE9YJL174W 831 nt4.25□□□□□ -1.73
LSM1P47017 POP4YBR257W 840 nt4.25□□□□□ -1.73
LSM1P47017 HIS4YCL030C 2400 nt4.25□□□□□ -1.73
LSM1P47017 TRS85YDR108W 2097 nt4.25□□□□□ -1.73
LSM1P47017 THI7YLR237W 1797 nt4.25□□□□□ -1.73
LSM1P47017 IFM1YOL023W 2031 nt4.24□□□□□ -1.73
LSM1P47017 VAC7YNL054W 3498 nt4.24□□□□□ -1.73
LSM1P47017 YCL041CYCL041C 495 nt4.24□□□□□ -1.73
LSM1P47017 YMR102CYMR102C 2505 nt4.23□□□□□ -1.73
LSM1P47017 YDR274CYDR274C 372 nt4.23□□□□□ -1.73
LSM1P47017 SRB5YGR104C 924 nt4.23□□□□□ -1.73
LSM1P47017 NSG1YHR133C 876 nt4.23□□□□□ -1.73
LSM1P47017 YIR017W-AYIR017W-A 600 nt4.23□□□□□ -1.73
LSM1P47017 YJL218WYJL218W 591 nt4.23□□□□□ -1.73
LSM1P47017 GSP2YOR185C 663 nt4.23□□□□□ -1.73
LSM1P47017 OM14YBR230C 405 nt4.23□□□□□ -1.73
LSM1P47017 PEP5YMR231W 3090 nt4.23□□□□□ -1.73
LSM1P47017 UGA2YBR006W 1494 nt4.23□□□□□ -1.73
LSM1P47017 SLO1YER180C-A 258 nt4.22□□□□□ -1.73
LSM1P47017 YIL028WYIL028W 399 nt4.22□□□□□ -1.73
LSM1P47017 ISA1YLL027W 753 nt4.22□□□□□ -1.73
LSM1P47017 UBI4YLL039C 1146 nt4.22□□□□□ -1.73
LSM1P47017 NOP13YNL175C 1212 nt4.22□□□□□ -1.73
LSM1P47017 SLD7YOR060C 774 nt4.22□□□□□ -1.73
LSM1P47017 YPL077CYPL077C 723 nt4.22□□□□□ -1.73
LSM1P47017 YBR056C-BYBR056C-B 159 nt4.22□□□□□ -1.73
LSM1P47017 SWC3YAL011W 1878 nt4.22□□□□□ -1.73
LSM1P47017 ATG18YFR021W 1503 nt4.21□□□□□ -1.73
LSM1P47017 IKS1YJL057C 2004 nt4.21□□□□□ -1.74
LSM1P47017 PRD1YCL057W 2139 nt4.21□□□□□ -1.74
LSM1P47017 OAF1YAL051W 3144 nt4.21□□□□□ -1.74
LSM1P47017 YKL169CYKL169C 384 nt4.21□□□□□ -1.74
LSM1P47017 NHP6AYPR052C 282 nt4.21□□□□□ -1.74
LSM1P47017 CBP1YJL209W 1965 nt4.21□□□□□ -1.74
LSM1P47017 RAD1YPL022W 3303 nt4.21□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 23.3 ms