Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 CLA4YNL298W 2529 nt5.6□□□□□ -1.51
RTR1P40084 YER158CYER158C 1722 nt5.6□□□□□ -1.51
RTR1P40084 RIP1YEL024W 648 nt5.6□□□□□ -1.51
RTR1P40084 YKR073CYKR073C 321 nt5.6□□□□□ -1.51
RTR1P40084 DRS1YLL008W 2259 nt5.6□□□□□ -1.51
RTR1P40084 OCA5YHL029C 2040 nt5.6□□□□□ -1.51
RTR1P40084 YPS7YDR349C 1791 nt5.6□□□□□ -1.51
RTR1P40084 YTA12YMR089C 2478 nt5.59□□□□□ -1.51
RTR1P40084 MRP21YBL090W 534 nt5.59□□□□□ -1.51
RTR1P40084 MVD1YNR043W 1191 nt5.59□□□□□ -1.51
RTR1P40084 MKS1YNL076W 1755 nt5.59□□□□□ -1.51
RTR1P40084 LYP1YNL268W 1836 nt5.58□□□□□ -1.52
RTR1P40084 TFG1YGR186W 2208 nt5.58□□□□□ -1.52
RTR1P40084 NAT2YGR147C 867 nt5.58□□□□□ -1.52
RTR1P40084 NMD4YLR363C 657 nt5.58□□□□□ -1.52
RTR1P40084 ATR1YML116W 1629 nt5.58□□□□□ -1.52
RTR1P40084 YMR221CYMR221C 1515 nt5.58□□□□□ -1.52
RTR1P40084 AZR1YGR224W 1842 nt5.58□□□□□ -1.52
RTR1P40084 YEL045CYEL045C 426 nt5.57□□□□□ -1.52
RTR1P40084 ISY1YJR050W 708 nt5.57□□□□□ -1.52
RTR1P40084 FBP1YLR377C 1047 nt5.57□□□□□ -1.52
RTR1P40084 YNL217WYNL217W 981 nt5.57□□□□□ -1.52
RTR1P40084 IMD2YHR216W 1572 nt5.57□□□□□ -1.52
RTR1P40084 LYS5YGL154C 819 nt5.56□□□□□ -1.52
RTR1P40084 VAM7YGL212W 951 nt5.56□□□□□ -1.52
RTR1P40084 DOM34YNL001W 1161 nt5.56□□□□□ -1.52
RTR1P40084 YNG1YOR064C 660 nt5.56□□□□□ -1.52
RTR1P40084 TIF5YPR041W 1218 nt5.56□□□□□ -1.52
RTR1P40084 NUP1YOR098C 3231 nt5.56□□□□□ -1.52
RTR1P40084 BOP2YLR267W 1713 nt5.56□□□□□ -1.52
RTR1P40084 PGM2YMR105C 1710 nt5.56□□□□□ -1.52
RTR1P40084 TUP1YCR084C 2142 nt5.56□□□□□ -1.52
RTR1P40084 RNA15YGL044C 891 nt5.55□□□□□ -1.52
RTR1P40084 PXR1YGR280C 816 nt5.55□□□□□ -1.52
RTR1P40084 GSY1YFR015C 2127 nt5.54□□□□□ -1.52
RTR1P40084 JJJ3YJR097W 519 nt5.54□□□□□ -1.52
RTR1P40084 RPL15BYMR121C 615 nt5.54□□□□□ -1.52
RTR1P40084 MET7YOR241W 1647 nt5.54□□□□□ -1.52
RTR1P40084 MKC7YDR144C 1791 nt5.54□□□□□ -1.52
RTR1P40084 PAH1YMR165C 2589 nt5.54□□□□□ -1.52
RTR1P40084 ENP1YBR247C 1452 nt5.53□□□□□ -1.52
RTR1P40084 TAF10YDR167W 621 nt5.53□□□□□ -1.52
RTR1P40084 MDY2YOL111C 639 nt5.53□□□□□ -1.52
RTR1P40084 YOR379CYOR379C 339 nt5.53□□□□□ -1.52
RTR1P40084 ARC40YBR234C 1155 nt5.53□□□□□ -1.52
RTR1P40084 NSI1YDR026C 1713 nt5.53□□□□□ -1.52
RTR1P40084 EAR1YMR171C 1653 nt5.53□□□□□ -1.52
RTR1P40084 FLC3YGL139W 2409 nt5.53□□□□□ -1.52
RTR1P40084 tK(CUU)CtK(CUU)C 73 nt5.52□□□□□ -1.53
RTR1P40084 tK(CUU)D1tK(CUU)D1 73 nt5.52□□□□□ -1.53
RTR1P40084 tK(CUU)D2tK(CUU)D2 73 nt5.52□□□□□ -1.53
RTR1P40084 tK(CUU)E1tK(CUU)E1 73 nt5.52□□□□□ -1.53
RTR1P40084 tK(CUU)E2tK(CUU)E2 73 nt5.52□□□□□ -1.53
RTR1P40084 tK(CUU)FtK(CUU)F 73 nt5.52□□□□□ -1.53
RTR1P40084 tK(CUU)G1tK(CUU)G1 73 nt5.52□□□□□ -1.53
RTR1P40084 tK(CUU)G2tK(CUU)G2 73 nt5.52□□□□□ -1.53
RTR1P40084 tK(CUU)G3tK(CUU)G3 73 nt5.52□□□□□ -1.53
RTR1P40084 tK(CUU)ItK(CUU)I 73 nt5.52□□□□□ -1.53
RTR1P40084 tK(CUU)JtK(CUU)J 73 nt5.52□□□□□ -1.53
RTR1P40084 tK(CUU)KtK(CUU)K 73 nt5.52□□□□□ -1.53
RTR1P40084 tK(CUU)MtK(CUU)M 73 nt5.52□□□□□ -1.53
RTR1P40084 tK(CUU)PtK(CUU)P 73 nt5.52□□□□□ -1.53
RTR1P40084 NTR2YKR022C 969 nt5.52□□□□□ -1.53
RTR1P40084 NKP2YLR315W 462 nt5.52□□□□□ -1.53
RTR1P40084 YIL001WYIL001W 1542 nt5.52□□□□□ -1.53
RTR1P40084 TFC7YOR110W 1308 nt5.51□□□□□ -1.53
RTR1P40084 MNN4YKL201C 3537 nt5.51□□□□□ -1.53
RTR1P40084 OCA4YCR095C 1089 nt5.51□□□□□ -1.53
RTR1P40084 SUR2YDR297W 1050 nt5.51□□□□□ -1.53
RTR1P40084 FRA2YGL220W 363 nt5.51□□□□□ -1.53
RTR1P40084 SPC34YKR037C 888 nt5.51□□□□□ -1.53
RTR1P40084 YIM1YMR152W 1098 nt5.51□□□□□ -1.53
RTR1P40084 RRN9YMR270C 1098 nt5.51□□□□□ -1.53
RTR1P40084 COG5YNL051W 1212 nt5.51□□□□□ -1.53
RTR1P40084 IMA3YIL172C 1770 nt5.5□□□□□ -1.53
RTR1P40084 IMA4YJL221C 1770 nt5.5□□□□□ -1.53
RTR1P40084 ARN1YHL040C 1884 nt5.5□□□□□ -1.53
RTR1P40084 PER1YCR044C 1074 nt5.5□□□□□ -1.53
RTR1P40084 RER1YCL001W 567 nt5.5□□□□□ -1.53
RTR1P40084 PMA1YGL008C 2757 nt5.5□□□□□ -1.53
RTR1P40084 FOX2YKR009C 2703 nt5.49□□□□□ -1.53
RTR1P40084 CTS2YDR371W 1536 nt5.49□□□□□ -1.53
RTR1P40084 snR7-SsnR7-S 179 nt5.49□□□□□ -1.53
RTR1P40084 GPP1YIL053W 753 nt5.49□□□□□ -1.53
RTR1P40084 PHM7YOL084W 2976 nt5.49□□□□□ -1.53
RTR1P40084 RRP40YOL142W 723 nt5.49□□□□□ -1.53
RTR1P40084 AIM17YHL021C 1398 nt5.49□□□□□ -1.53
RTR1P40084 FLO8YER109C 2400 nt5.49□□□□□ -1.53
RTR1P40084 JHD2YJR119C 2187 nt5.49□□□□□ -1.53
RTR1P40084 VBA1YMR088C 1689 nt5.48□□□□□ -1.53
RTR1P40084 COQ4YDR204W 1008 nt5.48□□□□□ -1.53
RTR1P40084 LOH1YJL038C 660 nt5.48□□□□□ -1.53
RTR1P40084 FMP46YKR049C 402 nt5.48□□□□□ -1.53
RTR1P40084 TVP38YKR088C 1014 nt5.48□□□□□ -1.53
RTR1P40084 YML131WYML131W 1098 nt5.48□□□□□ -1.53
RTR1P40084 PEX32YBR168W 1242 nt5.48□□□□□ -1.53
RTR1P40084 VAN1YML115C 1608 nt5.48□□□□□ -1.53
RTR1P40084 NUP2YLR335W 2163 nt5.48□□□□□ -1.53
RTR1P40084 RNR3YIL066C 2610 nt5.47□□□□□ -1.53
RTR1P40084 YNL247WYNL247W 2304 nt5.47□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 23.4 ms