Protein–RNA interactions for Protein: P35713

SOX18, Transcription factor SOX-18, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18P35713 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SOX18P35713 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SOX18P35713 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SOX18P35713 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.36■■□□□ 1.01
SOX18P35713 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SOX18P35713 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.36■■□□□ 1.01
SOX18P35713 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SOX18P35713 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
SOX18P35713 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SOX18P35713 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SOX18P35713 AC239859.2-201ENST00000444165 318 ntBASIC21.35■■□□□ 1.01
SOX18P35713 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.35■■□□□ 1.01
SOX18P35713 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.35■■□□□ 1.01
SOX18P35713 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SOX18P35713 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SOX18P35713 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SOX18P35713 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.35■■□□□ 1.01
SOX18P35713 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SOX18P35713 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SOX18P35713 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SOX18P35713 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.34■■□□□ 1.01
SOX18P35713 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.34■■□□□ 1.01
SOX18P35713 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SOX18P35713 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.34■■□□□ 1.01
SOX18P35713 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SOX18P35713 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SOX18P35713 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SOX18P35713 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SOX18P35713 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SOX18P35713 ALDH1A3-203ENST00000557963 1670 ntBASIC21.34■■□□□ 1.01
SOX18P35713 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SOX18P35713 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SOX18P35713 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.33■■□□□ 1.01
SOX18P35713 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SOX18P35713 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SOX18P35713 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.33■■□□□ 1.01
SOX18P35713 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.33■■□□□ 1.01
SOX18P35713 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.33■■□□□ 1.01
SOX18P35713 AC092028.1-203ENST00000608262 953 ntBASIC21.33■■□□□ 1.01
SOX18P35713 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SOX18P35713 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.33■■□□□ 1
SOX18P35713 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
SOX18P35713 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
SOX18P35713 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.33■■□□□ 1
SOX18P35713 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
SOX18P35713 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
SOX18P35713 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
SOX18P35713 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
SOX18P35713 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.32■■□□□ 1
SOX18P35713 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.32■■□□□ 1
SOX18P35713 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SOX18P35713 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SOX18P35713 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SOX18P35713 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SOX18P35713 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SOX18P35713 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.32■■□□□ 1
SOX18P35713 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
SOX18P35713 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.32■■□□□ 1
SOX18P35713 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.32■■□□□ 1
SOX18P35713 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.32■■□□□ 1
SOX18P35713 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.32■■□□□ 1
SOX18P35713 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.32■■□□□ 1
SOX18P35713 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.32■■□□□ 1
SOX18P35713 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SOX18P35713 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SOX18P35713 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SOX18P35713 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SOX18P35713 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SOX18P35713 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SOX18P35713 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SOX18P35713 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.31■■□□□ 1
SOX18P35713 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.31■■□□□ 1
SOX18P35713 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.31■■□□□ 1
SOX18P35713 MIR4787-201ENST00000607364 84 ntBASIC21.31■■□□□ 1
SOX18P35713 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SOX18P35713 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SOX18P35713 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.31■■□□□ 1
SOX18P35713 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.31■■□□□ 1
SOX18P35713 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SOX18P35713 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.3■■□□□ 1
SOX18P35713 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
SOX18P35713 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SOX18P35713 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SOX18P35713 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
SOX18P35713 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SOX18P35713 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.3■■□□□ 1
SOX18P35713 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.3■■□□□ 1
SOX18P35713 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.3■■□□□ 1
SOX18P35713 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SOX18P35713 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.3■■□□□ 1
SOX18P35713 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.3■■□□□ 1
SOX18P35713 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SOX18P35713 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
SOX18P35713 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SOX18P35713 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SOX18P35713 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.29■■□□□ 1
SOX18P35713 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SOX18P35713 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.29■■□□□ 1
SOX18P35713 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.29■■□□□ 1
SOX18P35713 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms