Protein–RNA interactions for Protein: P34110

VPS35, Vacuolar protein sorting-associated protein 35, yeastyeast

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS35P34110 PLP1YDR183W 693 nt6.46□□□□□ -1.38
VPS35P34110 CBF1YJR060W 1056 nt6.46□□□□□ -1.38
VPS35P34110 NTR2YKR022C 969 nt6.46□□□□□ -1.38
VPS35P34110 SPC2YML055W 537 nt6.46□□□□□ -1.38
VPS35P34110 GSP2YOR185C 663 nt6.46□□□□□ -1.38
VPS35P34110 GUD1YDL238C 1470 nt6.46□□□□□ -1.38
VPS35P34110 CNA1YLR433C 1662 nt6.45□□□□□ -1.38
VPS35P34110 RAD57YDR004W 1383 nt6.45□□□□□ -1.38
VPS35P34110 NUF2YOL069W 1356 nt6.45□□□□□ -1.38
VPS35P34110 HAP2YGL237C 798 nt6.45□□□□□ -1.38
VPS35P34110 QNS1YHR074W 2145 nt6.45□□□□□ -1.38
VPS35P34110 EGD2YHR193C 525 nt6.45□□□□□ -1.38
VPS35P34110 YIL077CYIL077C 963 nt6.45□□□□□ -1.38
VPS35P34110 YJL032WYJL032W 315 nt6.45□□□□□ -1.38
VPS35P34110 YLR156WYLR156W 345 nt6.45□□□□□ -1.38
VPS35P34110 YLR157W-DYLR157W-D 213 nt6.45□□□□□ -1.38
VPS35P34110 YLR159WYLR159W 345 nt6.45□□□□□ -1.38
VPS35P34110 YLR161WYLR161W 345 nt6.45□□□□□ -1.38
VPS35P34110 YMR084WYMR084W 789 nt6.45□□□□□ -1.38
VPS35P34110 SET6YPL165C 1122 nt6.45□□□□□ -1.38
VPS35P34110 RPN7YPR108W 1290 nt6.45□□□□□ -1.38
VPS35P34110 YBR134WYBR134W 402 nt6.45□□□□□ -1.38
VPS35P34110 FUM1YPL262W 1467 nt6.45□□□□□ -1.38
VPS35P34110 GYP1YOR070C 1914 nt6.44□□□□□ -1.38
VPS35P34110 LDB19YOR322C 2457 nt6.44□□□□□ -1.38
VPS35P34110 DFM1YDR411C 1026 nt6.44□□□□□ -1.38
VPS35P34110 YHR069C-AYHR069C-A 363 nt6.44□□□□□ -1.38
VPS35P34110 RPC25YKL144C 639 nt6.44□□□□□ -1.38
VPS35P34110 SLZ1YNL196C 897 nt6.44□□□□□ -1.38
VPS35P34110 STE50YCL032W 1041 nt6.44□□□□□ -1.38
VPS35P34110 SDA1YGR245C 2304 nt6.44□□□□□ -1.38
VPS35P34110 KKQ8YKL168C 2175 nt6.44□□□□□ -1.38
VPS35P34110 YEL020CYEL020C 1683 nt6.43□□□□□ -1.38
VPS35P34110 BZZ1YHR114W 1902 nt6.43□□□□□ -1.38
VPS35P34110 IBA57YJR122W 1494 nt6.43□□□□□ -1.38
VPS35P34110 ATG4YNL223W 1485 nt6.43□□□□□ -1.38
VPS35P34110 YDL119CYDL119C 924 nt6.43□□□□□ -1.38
VPS35P34110 YDL186WYDL186W 834 nt6.43□□□□□ -1.38
VPS35P34110 RPB7YDR404C 516 nt6.43□□□□□ -1.38
VPS35P34110 MRPS35YGR165W 1038 nt6.43□□□□□ -1.38
VPS35P34110 GTT1YIR038C 705 nt6.43□□□□□ -1.38
VPS35P34110 YLR202CYLR202C 327 nt6.43□□□□□ -1.38
VPS35P34110 YIF1YNL263C 945 nt6.43□□□□□ -1.38
VPS35P34110 IZH4YOL101C 939 nt6.43□□□□□ -1.38
VPS35P34110 YBR013CYBR013C 390 nt6.43□□□□□ -1.38
VPS35P34110 CNE1YAL058W 1509 nt6.42□□□□□ -1.38
VPS35P34110 ADY3YDL239C 2373 nt6.42□□□□□ -1.38
VPS35P34110 COX9YDL067C 180 nt6.42□□□□□ -1.38
VPS35P34110 COS7YDL248W 1152 nt6.42□□□□□ -1.38
VPS35P34110 MRPL7YDR237W 879 nt6.42□□□□□ -1.38
VPS35P34110 YGR270C-AYGR270C-A 219 nt6.42□□□□□ -1.38
VPS35P34110 tR(ACG)DtR(ACG)D 73 nt6.42□□□□□ -1.38
VPS35P34110 tR(ACG)EtR(ACG)E 73 nt6.42□□□□□ -1.38
VPS35P34110 tR(ACG)KtR(ACG)K 73 nt6.42□□□□□ -1.38
VPS35P34110 tR(ACG)LtR(ACG)L 73 nt6.42□□□□□ -1.38
VPS35P34110 tR(ACG)OtR(ACG)O 73 nt6.42□□□□□ -1.38
VPS35P34110 YIL102C-AYIL102C-A 228 nt6.42□□□□□ -1.38
VPS35P34110 COS5YJR161C 1152 nt6.42□□□□□ -1.38
VPS35P34110 MTD1YKR080W 963 nt6.42□□□□□ -1.38
VPS35P34110 VPS71YML041C 843 nt6.42□□□□□ -1.38
VPS35P34110 YPR142CYPR142C 564 nt6.42□□□□□ -1.38
VPS35P34110 SRO9YCL037C 1305 nt6.42□□□□□ -1.38
VPS35P34110 SHE9YDR393W 1371 nt6.42□□□□□ -1.38
VPS35P34110 ISN1YOR155C 1353 nt6.42□□□□□ -1.38
VPS35P34110 SSU1YPL092W 1377 nt6.42□□□□□ -1.38
VPS35P34110 YLR108CYLR108C 1458 nt6.41□□□□□ -1.38
VPS35P34110 AFG1YEL052W 1530 nt6.41□□□□□ -1.38
VPS35P34110 PCT1YGR202C 1275 nt6.41□□□□□ -1.38
VPS35P34110 SPO7YAL009W 780 nt6.41□□□□□ -1.38
VPS35P34110 PER33YLR064W 822 nt6.41□□□□□ -1.38
VPS35P34110 GPN3YLR243W 819 nt6.41□□□□□ -1.38
VPS35P34110 GAB1YLR459W 1185 nt6.41□□□□□ -1.38
VPS35P34110 YNR025CYNR025C 360 nt6.41□□□□□ -1.38
VPS35P34110 YMR1YJR110W 2067 nt6.41□□□□□ -1.38
VPS35P34110 TEP1YNL128W 1305 nt6.41□□□□□ -1.38
VPS35P34110 EMW1YNL313C 2715 nt6.41□□□□□ -1.38
VPS35P34110 DCV1YFR012W 609 nt6.4□□□□□ -1.38
VPS35P34110 Q0142Q0142 177 nt6.4□□□□□ -1.38
VPS35P34110 YJL156W-AYJL156W-A 222 nt6.4□□□□□ -1.38
VPS35P34110 TTI2YJR136C 1266 nt6.4□□□□□ -1.38
VPS35P34110 RPS0BYLR048W 759 nt6.4□□□□□ -1.38
VPS35P34110 CSL4YNL232W 879 nt6.4□□□□□ -1.38
VPS35P34110 AAD15YOL165C 432 nt6.4□□□□□ -1.38
VPS35P34110 MED8YBR193C 672 nt6.4□□□□□ -1.38
VPS35P34110 snR3snR3 194 nt6.4□□□□□ -1.38
VPS35P34110 LDB17YDL146W 1476 nt6.4□□□□□ -1.39
VPS35P34110 SKI2YLR398C 3864 nt6.4□□□□□ -1.39
VPS35P34110 ALG9YNL219C 1668 nt6.39□□□□□ -1.39
VPS35P34110 MSS2YDL107W 1056 nt6.39□□□□□ -1.39
VPS35P34110 YDL172CYDL172C 480 nt6.39□□□□□ -1.39
VPS35P34110 MTQ2YDR140W 666 nt6.39□□□□□ -1.39
VPS35P34110 SUP19tS(UGA)E 82 nt6.39□□□□□ -1.39
VPS35P34110 SUP17tS(UGA)I 82 nt6.39□□□□□ -1.39
VPS35P34110 SUP16tS(UGA)P 82 nt6.39□□□□□ -1.39
VPS35P34110 ARP1YHR129C 1155 nt6.39□□□□□ -1.39
VPS35P34110 SNL1YIL016W 480 nt6.39□□□□□ -1.39
VPS35P34110 YBL094CYBL094C 333 nt6.39□□□□□ -1.39
VPS35P34110 UBC11YOR339C 471 nt6.39□□□□□ -1.39
VPS35P34110 MUM2YBR057C 1101 nt6.39□□□□□ -1.39
VPS35P34110 YPR153WYPR153W 423 nt6.39□□□□□ -1.39
Retrieved 100 of 7,029 protein–RNA pairs in 33 ms