Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.77■■□□□ 1.08
HTR1EP28566 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
HTR1EP28566 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTR1EP28566 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
HTR1EP28566 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
HTR1EP28566 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTR1EP28566 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTR1EP28566 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.77■■□□□ 1.08
HTR1EP28566 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.77■■□□□ 1.08
HTR1EP28566 AL356441.2-201ENST00000443009 864 ntBASIC21.77■■□□□ 1.08
HTR1EP28566 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTR1EP28566 AL031848.2-201ENST00000607670 837 ntBASIC21.77■■□□□ 1.08
HTR1EP28566 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
HTR1EP28566 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTR1EP28566 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTR1EP28566 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HTR1EP28566 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HTR1EP28566 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HTR1EP28566 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
HTR1EP28566 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.76■■□□□ 1.07
HTR1EP28566 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.76■■□□□ 1.07
HTR1EP28566 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.76■■□□□ 1.07
HTR1EP28566 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.76■■□□□ 1.07
HTR1EP28566 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.76■■□□□ 1.07
HTR1EP28566 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
HTR1EP28566 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
HTR1EP28566 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.75■■□□□ 1.07
HTR1EP28566 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HTR1EP28566 KRT18P10-201ENST00000388836 1287 ntBASIC21.75■■□□□ 1.07
HTR1EP28566 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.75■■□□□ 1.07
HTR1EP28566 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HTR1EP28566 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
HTR1EP28566 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
HTR1EP28566 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HTR1EP28566 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HTR1EP28566 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HTR1EP28566 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.74■■□□□ 1.07
HTR1EP28566 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
HTR1EP28566 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.74■■□□□ 1.07
HTR1EP28566 AC103724.3-201ENST00000564481 992 ntBASIC21.74■■□□□ 1.07
HTR1EP28566 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.74■■□□□ 1.07
HTR1EP28566 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HTR1EP28566 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
HTR1EP28566 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HTR1EP28566 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.74■■□□□ 1.07
HTR1EP28566 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.73■■□□□ 1.07
HTR1EP28566 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR1EP28566 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR1EP28566 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR1EP28566 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
HTR1EP28566 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.73■■□□□ 1.07
HTR1EP28566 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR1EP28566 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.73■■□□□ 1.07
HTR1EP28566 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR1EP28566 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR1EP28566 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR1EP28566 AC233723.2-201ENST00000623798 2106 ntBASIC21.73■■□□□ 1.07
HTR1EP28566 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HTR1EP28566 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.72■■□□□ 1.07
HTR1EP28566 ANOS2P-203ENST00000472227 1816 ntBASIC21.72■■□□□ 1.07
HTR1EP28566 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
HTR1EP28566 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HTR1EP28566 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HTR1EP28566 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.72■■□□□ 1.07
HTR1EP28566 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.72■■□□□ 1.07
HTR1EP28566 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HTR1EP28566 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.72■■□□□ 1.07
HTR1EP28566 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.72■■□□□ 1.07
HTR1EP28566 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HTR1EP28566 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HTR1EP28566 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HTR1EP28566 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
HTR1EP28566 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HTR1EP28566 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.71■■□□□ 1.07
HTR1EP28566 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HTR1EP28566 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HTR1EP28566 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
HTR1EP28566 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1EP28566 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1EP28566 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1EP28566 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.7■■□□□ 1.06
HTR1EP28566 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.7■■□□□ 1.06
HTR1EP28566 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
HTR1EP28566 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1EP28566 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
HTR1EP28566 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1EP28566 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1EP28566 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1EP28566 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1EP28566 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1EP28566 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.7■■□□□ 1.06
HTR1EP28566 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
HTR1EP28566 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
HTR1EP28566 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HTR1EP28566 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HTR1EP28566 MIR935-201ENST00000401179 91 ntBASIC21.69■■□□□ 1.06
HTR1EP28566 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
HTR1EP28566 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
HTR1EP28566 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.69■■□□□ 1.06
HTR1EP28566 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms