Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
BRD2P25440 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
BRD2P25440 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
BRD2P25440 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
BRD2P25440 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
BRD2P25440 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.34■■□□□ 1.49
BRD2P25440 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.34■■□□□ 1.49
BRD2P25440 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
BRD2P25440 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
BRD2P25440 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.34■■□□□ 1.49
BRD2P25440 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
BRD2P25440 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
BRD2P25440 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
BRD2P25440 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.34■■□□□ 1.49
BRD2P25440 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
BRD2P25440 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
BRD2P25440 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.33■■□□□ 1.49
BRD2P25440 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.33■■□□□ 1.49
BRD2P25440 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
BRD2P25440 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
BRD2P25440 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC24.33■■□□□ 1.48
BRD2P25440 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
BRD2P25440 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.32■■□□□ 1.48
BRD2P25440 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
BRD2P25440 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
BRD2P25440 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
BRD2P25440 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
BRD2P25440 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
BRD2P25440 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
BRD2P25440 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.32■■□□□ 1.48
BRD2P25440 AC092028.1-203ENST00000608262 953 ntBASIC24.32■■□□□ 1.48
BRD2P25440 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.32■■□□□ 1.48
BRD2P25440 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
BRD2P25440 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
BRD2P25440 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
BRD2P25440 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
BRD2P25440 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
BRD2P25440 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
BRD2P25440 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.31■■□□□ 1.48
BRD2P25440 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.31■■□□□ 1.48
BRD2P25440 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
BRD2P25440 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.31■■□□□ 1.48
BRD2P25440 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.31■■□□□ 1.48
BRD2P25440 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
BRD2P25440 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
BRD2P25440 ALDH1A3-203ENST00000557963 1670 ntBASIC24.3■■□□□ 1.48
BRD2P25440 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
BRD2P25440 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
BRD2P25440 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
BRD2P25440 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
BRD2P25440 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
BRD2P25440 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
BRD2P25440 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.3■■□□□ 1.48
BRD2P25440 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.3■■□□□ 1.48
BRD2P25440 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
BRD2P25440 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC24.3■■□□□ 1.48
BRD2P25440 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.3■■□□□ 1.48
BRD2P25440 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
BRD2P25440 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
BRD2P25440 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
BRD2P25440 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
BRD2P25440 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
BRD2P25440 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.29■■□□□ 1.48
BRD2P25440 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.29■■□□□ 1.48
BRD2P25440 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.29■■□□□ 1.48
BRD2P25440 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.29■■□□□ 1.48
BRD2P25440 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
BRD2P25440 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
BRD2P25440 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
BRD2P25440 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
BRD2P25440 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
BRD2P25440 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
BRD2P25440 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.28■■□□□ 1.48
BRD2P25440 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.28■■□□□ 1.48
BRD2P25440 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
BRD2P25440 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
BRD2P25440 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
BRD2P25440 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.28■■□□□ 1.48
BRD2P25440 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
BRD2P25440 TSPY9P-201ENST00000440215 945 ntBASIC24.28■■□□□ 1.48
BRD2P25440 TSPY11P-201ENST00000442607 1045 ntBASIC24.28■■□□□ 1.48
BRD2P25440 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
BRD2P25440 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
BRD2P25440 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
BRD2P25440 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.28■■□□□ 1.48
BRD2P25440 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.28■■□□□ 1.48
BRD2P25440 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
BRD2P25440 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
BRD2P25440 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.27■■□□□ 1.48
BRD2P25440 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.27■■□□□ 1.48
BRD2P25440 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
BRD2P25440 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
BRD2P25440 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
BRD2P25440 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
BRD2P25440 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
BRD2P25440 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
BRD2P25440 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.26■■□□□ 1.47
BRD2P25440 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
BRD2P25440 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.26■■□□□ 1.47
BRD2P25440 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms