Protein–RNA interactions for Protein: P23258

TUBG1, Tubulin gamma-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBG1P23258 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBG1P23258 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TUBG1P23258 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.7■□□□□ 0.74
TUBG1P23258 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.7■□□□□ 0.74
TUBG1P23258 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.7■□□□□ 0.74
TUBG1P23258 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.7■□□□□ 0.74
TUBG1P23258 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.7■□□□□ 0.74
TUBG1P23258 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.7■□□□□ 0.74
TUBG1P23258 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.7■□□□□ 0.74
TUBG1P23258 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.7■□□□□ 0.74
TUBG1P23258 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TUBG1P23258 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TUBG1P23258 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.7■□□□□ 0.74
TUBG1P23258 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TUBG1P23258 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBG1P23258 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBG1P23258 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBG1P23258 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TUBG1P23258 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBG1P23258 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.69■□□□□ 0.74
TUBG1P23258 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
TUBG1P23258 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.69■□□□□ 0.74
TUBG1P23258 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBG1P23258 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBG1P23258 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.69■□□□□ 0.74
TUBG1P23258 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.69■□□□□ 0.74
TUBG1P23258 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
TUBG1P23258 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TUBG1P23258 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBG1P23258 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.68■□□□□ 0.74
TUBG1P23258 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.68■□□□□ 0.74
TUBG1P23258 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.68■□□□□ 0.74
TUBG1P23258 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.68■□□□□ 0.74
TUBG1P23258 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TUBG1P23258 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TUBG1P23258 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TUBG1P23258 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.68■□□□□ 0.74
TUBG1P23258 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
TUBG1P23258 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TUBG1P23258 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBG1P23258 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.67■□□□□ 0.74
TUBG1P23258 ALDH1A3-203ENST00000557963 1670 ntBASIC19.67■□□□□ 0.74
TUBG1P23258 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TUBG1P23258 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TUBG1P23258 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TUBG1P23258 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TUBG1P23258 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TUBG1P23258 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TUBG1P23258 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
TUBG1P23258 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBG1P23258 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
TUBG1P23258 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBG1P23258 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBG1P23258 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
TUBG1P23258 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TUBG1P23258 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.66■□□□□ 0.74
TUBG1P23258 MTDHP2-201ENST00000601468 714 ntBASIC19.66■□□□□ 0.74
TUBG1P23258 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.66■□□□□ 0.74
TUBG1P23258 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TUBG1P23258 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TUBG1P23258 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TUBG1P23258 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TUBG1P23258 AC093323.1-202ENST00000635031 2045 ntBASIC19.66■□□□□ 0.74
TUBG1P23258 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.66■□□□□ 0.74
TUBG1P23258 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.66■□□□□ 0.74
TUBG1P23258 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBG1P23258 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBG1P23258 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBG1P23258 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBG1P23258 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TUBG1P23258 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
TUBG1P23258 GUSBP5-201ENST00000418136 578 ntBASIC19.65■□□□□ 0.74
TUBG1P23258 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
TUBG1P23258 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TUBG1P23258 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBG1P23258 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TUBG1P23258 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.65■□□□□ 0.74
TUBG1P23258 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.65■□□□□ 0.74
TUBG1P23258 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TUBG1P23258 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TUBG1P23258 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TUBG1P23258 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBG1P23258 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TUBG1P23258 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TUBG1P23258 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TUBG1P23258 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBG1P23258 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBG1P23258 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TUBG1P23258 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TUBG1P23258 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.64■□□□□ 0.73
TUBG1P23258 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TUBG1P23258 AC010997.5-201ENST00000609182 354 ntBASIC19.64■□□□□ 0.73
TUBG1P23258 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.64■□□□□ 0.73
TUBG1P23258 AC005703.6-201ENST00000623265 1329 ntBASIC19.64■□□□□ 0.73
TUBG1P23258 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TUBG1P23258 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TUBG1P23258 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBG1P23258 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBG1P23258 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBG1P23258 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms