Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
TNFAIP3P21580 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TNFAIP3P21580 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.37■■□□□ 1.49
TNFAIP3P21580 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
TNFAIP3P21580 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
TNFAIP3P21580 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.36■■□□□ 1.49
TNFAIP3P21580 ANOS2P-203ENST00000472227 1816 ntBASIC24.36■■□□□ 1.49
TNFAIP3P21580 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.36■■□□□ 1.49
TNFAIP3P21580 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TNFAIP3P21580 AL033527.3-201ENST00000566366 1196 ntBASIC24.36■■□□□ 1.49
TNFAIP3P21580 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
TNFAIP3P21580 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TNFAIP3P21580 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TNFAIP3P21580 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
TNFAIP3P21580 AC012676.1-201ENST00000574705 1949 ntBASIC24.35■■□□□ 1.49
TNFAIP3P21580 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TNFAIP3P21580 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TNFAIP3P21580 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.35■■□□□ 1.49
TNFAIP3P21580 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.35■■□□□ 1.49
TNFAIP3P21580 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.35■■□□□ 1.49
TNFAIP3P21580 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
TNFAIP3P21580 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
TNFAIP3P21580 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
TNFAIP3P21580 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TNFAIP3P21580 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.34■■□□□ 1.49
TNFAIP3P21580 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TNFAIP3P21580 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.34■■□□□ 1.49
TNFAIP3P21580 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
TNFAIP3P21580 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
TNFAIP3P21580 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.34■■□□□ 1.49
TNFAIP3P21580 ALDH1A3-203ENST00000557963 1670 ntBASIC24.34■■□□□ 1.49
TNFAIP3P21580 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.34■■□□□ 1.49
TNFAIP3P21580 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
TNFAIP3P21580 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.33■■□□□ 1.49
TNFAIP3P21580 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TNFAIP3P21580 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
TNFAIP3P21580 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.33■■□□□ 1.49
TNFAIP3P21580 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
TNFAIP3P21580 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.33■■□□□ 1.49
TNFAIP3P21580 MIR4281-201ENST00000580852 62 ntBASIC24.33■■□□□ 1.49
TNFAIP3P21580 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TNFAIP3P21580 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
TNFAIP3P21580 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.32■■□□□ 1.48
TNFAIP3P21580 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.32■■□□□ 1.48
TNFAIP3P21580 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TNFAIP3P21580 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.32■■□□□ 1.48
TNFAIP3P21580 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.32■■□□□ 1.48
TNFAIP3P21580 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
TNFAIP3P21580 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TNFAIP3P21580 AF131216.4-201ENST00000638924 1588 ntBASIC24.32■■□□□ 1.48
TNFAIP3P21580 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TNFAIP3P21580 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
TNFAIP3P21580 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.31■■□□□ 1.48
TNFAIP3P21580 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.31■■□□□ 1.48
TNFAIP3P21580 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TNFAIP3P21580 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
TNFAIP3P21580 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.31■■□□□ 1.48
TNFAIP3P21580 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TNFAIP3P21580 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TNFAIP3P21580 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.31■■□□□ 1.48
TNFAIP3P21580 C9orf163-202ENST00000624034 2573 ntBASIC24.31■■□□□ 1.48
TNFAIP3P21580 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.3■■□□□ 1.48
TNFAIP3P21580 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TNFAIP3P21580 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TNFAIP3P21580 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TNFAIP3P21580 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TNFAIP3P21580 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TNFAIP3P21580 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
TNFAIP3P21580 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.3■■□□□ 1.48
TNFAIP3P21580 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.3■■□□□ 1.48
TNFAIP3P21580 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TNFAIP3P21580 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TNFAIP3P21580 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TNFAIP3P21580 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TNFAIP3P21580 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TNFAIP3P21580 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.29■■□□□ 1.48
TNFAIP3P21580 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TNFAIP3P21580 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.29■■□□□ 1.48
TNFAIP3P21580 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TNFAIP3P21580 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.29■■□□□ 1.48
TNFAIP3P21580 MIR4508-201ENST00000584178 70 ntBASIC24.29■■□□□ 1.48
TNFAIP3P21580 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.29■■□□□ 1.48
TNFAIP3P21580 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TNFAIP3P21580 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
TNFAIP3P21580 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.28■■□□□ 1.48
TNFAIP3P21580 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
TNFAIP3P21580 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TNFAIP3P21580 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.28■■□□□ 1.48
TNFAIP3P21580 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.28■■□□□ 1.48
TNFAIP3P21580 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TNFAIP3P21580 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
TNFAIP3P21580 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TNFAIP3P21580 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TNFAIP3P21580 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
TNFAIP3P21580 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.27■■□□□ 1.48
TNFAIP3P21580 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.27■■□□□ 1.48
TNFAIP3P21580 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TNFAIP3P21580 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.27■■□□□ 1.48
TNFAIP3P21580 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TNFAIP3P21580 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms