Protein–RNA interactions for Protein: P08047

SP1, Transcription factor Sp1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP1P08047 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.78■□□□□ 0.92
SP1P08047 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SP1P08047 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SP1P08047 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.77■□□□□ 0.92
SP1P08047 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SP1P08047 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.77■□□□□ 0.92
SP1P08047 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SP1P08047 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SP1P08047 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SP1P08047 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SP1P08047 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SP1P08047 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SP1P08047 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SP1P08047 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SP1P08047 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SP1P08047 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
SP1P08047 C17orf82-201ENST00000623772 1530 ntBASIC20.76■□□□□ 0.91
SP1P08047 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SP1P08047 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.76■□□□□ 0.91
SP1P08047 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.76■□□□□ 0.91
SP1P08047 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SP1P08047 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.76■□□□□ 0.91
SP1P08047 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.76■□□□□ 0.91
SP1P08047 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SP1P08047 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SP1P08047 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SP1P08047 ALDH1A3-203ENST00000557963 1670 ntBASIC20.75■□□□□ 0.91
SP1P08047 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SP1P08047 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.75■□□□□ 0.91
SP1P08047 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SP1P08047 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
SP1P08047 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SP1P08047 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SP1P08047 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SP1P08047 SERBP1P1-201ENST00000396021 1160 ntBASIC20.74■□□□□ 0.91
SP1P08047 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SP1P08047 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.74■□□□□ 0.91
SP1P08047 AC241377.3-202ENST00000626088 1088 ntBASIC20.74■□□□□ 0.91
SP1P08047 AC241585.3-202ENST00000628937 1088 ntBASIC20.74■□□□□ 0.91
SP1P08047 AC245100.8-202ENST00000629247 1058 ntBASIC20.74■□□□□ 0.91
SP1P08047 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
SP1P08047 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SP1P08047 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SP1P08047 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SP1P08047 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SP1P08047 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SP1P08047 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SP1P08047 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SP1P08047 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SP1P08047 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.73■□□□□ 0.91
SP1P08047 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.73■□□□□ 0.91
SP1P08047 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SP1P08047 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SP1P08047 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SP1P08047 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SP1P08047 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SP1P08047 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SP1P08047 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SP1P08047 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SP1P08047 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.72■□□□□ 0.91
SP1P08047 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.72■□□□□ 0.91
SP1P08047 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SP1P08047 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.72■□□□□ 0.91
SP1P08047 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SP1P08047 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SP1P08047 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SP1P08047 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SP1P08047 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SP1P08047 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.71■□□□□ 0.91
SP1P08047 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SP1P08047 AL138724.1-201ENST00000606771 1088 ntBASIC20.71■□□□□ 0.91
SP1P08047 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.71■□□□□ 0.91
SP1P08047 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SP1P08047 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SP1P08047 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SP1P08047 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SP1P08047 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.71■□□□□ 0.91
SP1P08047 AC135731.1-201ENST00000569415 2548 ntBASIC20.7■□□□□ 0.9
SP1P08047 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SP1P08047 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SP1P08047 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SP1P08047 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SP1P08047 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.7■□□□□ 0.9
SP1P08047 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.7■□□□□ 0.9
SP1P08047 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.7■□□□□ 0.9
SP1P08047 ZNRF2P3-201ENST00000424200 374 ntBASIC20.7■□□□□ 0.9
SP1P08047 MIR4767-201ENST00000582827 78 ntBASIC20.7■□□□□ 0.9
SP1P08047 AL136967.2-201ENST00000623968 743 ntBASIC20.7■□□□□ 0.9
SP1P08047 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.7■□□□□ 0.9
SP1P08047 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SP1P08047 AC142381.3-201ENST00000568208 1670 ntBASIC20.7■□□□□ 0.9
SP1P08047 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SP1P08047 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SP1P08047 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.69■□□□□ 0.9
SP1P08047 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SP1P08047 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.69■□□□□ 0.9
SP1P08047 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SP1P08047 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.69■□□□□ 0.9
SP1P08047 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.69■□□□□ 0.9
SP1P08047 AF213884.3-201ENST00000563833 479 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms