Protein–RNA interactions for Protein: P05388

RPLP0, 60S acidic ribosomal protein P0, humanhuman

Known RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0P05388 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPLP0P05388 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
RPLP0P05388 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RPLP0P05388 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RPLP0P05388 AC131274.2-201ENST00000580697 1507 ntBASIC22.23■■□□□ 1.15
RPLP0P05388 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RPLP0P05388 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RPLP0P05388 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.23■■□□□ 1.15
RPLP0P05388 AC024257.2-201ENST00000549699 147 ntBASIC22.23■■□□□ 1.15
RPLP0P05388 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RPLP0P05388 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RPLP0P05388 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RPLP0P05388 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RPLP0P05388 ZNRF2P3-201ENST00000424200 374 ntBASIC22.22■■□□□ 1.15
RPLP0P05388 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RPLP0P05388 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.22■■□□□ 1.15
RPLP0P05388 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RPLP0P05388 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
RPLP0P05388 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RPLP0P05388 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RPLP0P05388 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RPLP0P05388 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPLP0P05388 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPLP0P05388 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPLP0P05388 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.21■■□□□ 1.15
RPLP0P05388 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
RPLP0P05388 AL031432.3-201ENST00000607698 485 ntBASIC22.21■■□□□ 1.15
RPLP0P05388 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPLP0P05388 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPLP0P05388 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPLP0P05388 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
RPLP0P05388 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
RPLP0P05388 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RPLP0P05388 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.2■■□□□ 1.14
RPLP0P05388 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RPLP0P05388 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.2■■□□□ 1.14
RPLP0P05388 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
RPLP0P05388 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.2■■□□□ 1.14
RPLP0P05388 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RPLP0P05388 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RPLP0P05388 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
RPLP0P05388 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.19■■□□□ 1.14
RPLP0P05388 SUDS3P1-201ENST00000505831 966 ntBASIC22.19■■□□□ 1.14
RPLP0P05388 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RPLP0P05388 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.19■■□□□ 1.14
RPLP0P05388 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
RPLP0P05388 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
RPLP0P05388 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RPLP0P05388 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.18■■□□□ 1.14
RPLP0P05388 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RPLP0P05388 EDA-201ENST00000338901 1233 ntBASIC22.18■■□□□ 1.14
RPLP0P05388 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RPLP0P05388 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.18■■□□□ 1.14
RPLP0P05388 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
RPLP0P05388 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RPLP0P05388 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.18■■□□□ 1.14
RPLP0P05388 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RPLP0P05388 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RPLP0P05388 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
RPLP0P05388 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
RPLP0P05388 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RPLP0P05388 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RPLP0P05388 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
RPLP0P05388 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
RPLP0P05388 DUX4L19-201ENST00000557448 1267 ntBASIC22.17■■□□□ 1.14
RPLP0P05388 AL355001.2-201ENST00000620617 1191 ntBASIC22.17■■□□□ 1.14
RPLP0P05388 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.17■■□□□ 1.14
RPLP0P05388 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RPLP0P05388 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RPLP0P05388 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.16■■□□□ 1.14
RPLP0P05388 MIR6089-201ENST00000616698 64 ntBASIC22.16■■□□□ 1.14
RPLP0P05388 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
RPLP0P05388 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.15■■□□□ 1.14
RPLP0P05388 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RPLP0P05388 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPLP0P05388 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPLP0P05388 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RPLP0P05388 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.15■■□□□ 1.14
RPLP0P05388 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.15■■□□□ 1.14
RPLP0P05388 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RPLP0P05388 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RPLP0P05388 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
RPLP0P05388 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.15■■□□□ 1.14
RPLP0P05388 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RPLP0P05388 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPLP0P05388 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RPLP0P05388 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RPLP0P05388 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RPLP0P05388 SYT6-210ENST00000641643 1587 ntBASIC22.14■■□□□ 1.13
RPLP0P05388 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RPLP0P05388 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.14■■□□□ 1.13
RPLP0P05388 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.14■■□□□ 1.13
RPLP0P05388 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.14■■□□□ 1.13
RPLP0P05388 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
RPLP0P05388 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.14■■□□□ 1.13
RPLP0P05388 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RPLP0P05388 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
RPLP0P05388 AL022069.1-201ENST00000568025 1636 ntBASIC22.13■■□□□ 1.13
RPLP0P05388 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
RPLP0P05388 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms