Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
MT-ND4P03905 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND4P03905 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND4P03905 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND4P03905 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.74■□□□□ 0.75
MT-ND4P03905 PKD1P6-201ENST00000343738 4769 ntBASIC19.74■□□□□ 0.75
MT-ND4P03905 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND4P03905 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND4P03905 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND4P03905 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND4P03905 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.74■□□□□ 0.75
MT-ND4P03905 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND4P03905 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND4P03905 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
MT-ND4P03905 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.73■□□□□ 0.75
MT-ND4P03905 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND4P03905 AC007375.3-201ENST00000600936 2314 ntBASIC19.73■□□□□ 0.75
MT-ND4P03905 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.73■□□□□ 0.75
MT-ND4P03905 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
MT-ND4P03905 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND4P03905 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND4P03905 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
MT-ND4P03905 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
MT-ND4P03905 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND4P03905 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND4P03905 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND4P03905 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.72■□□□□ 0.75
MT-ND4P03905 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND4P03905 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
MT-ND4P03905 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND4P03905 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND4P03905 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND4P03905 GUSBP5-202ENST00000510805 1989 ntBASIC19.72■□□□□ 0.75
MT-ND4P03905 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND4P03905 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND4P03905 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.71■□□□□ 0.75
MT-ND4P03905 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND4P03905 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND4P03905 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND4P03905 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND4P03905 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND4P03905 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND4P03905 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND4P03905 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.71■□□□□ 0.75
MT-ND4P03905 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND4P03905 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND4P03905 AC137767.1-201ENST00000602918 1920 ntBASIC19.7■□□□□ 0.74
MT-ND4P03905 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND4P03905 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND4P03905 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
MT-ND4P03905 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND4P03905 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND4P03905 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND4P03905 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.7■□□□□ 0.74
MT-ND4P03905 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND4P03905 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND4P03905 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND4P03905 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.69■□□□□ 0.74
MT-ND4P03905 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND4P03905 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.69■□□□□ 0.74
MT-ND4P03905 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND4P03905 KRT18P10-201ENST00000388836 1287 ntBASIC19.69■□□□□ 0.74
MT-ND4P03905 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
MT-ND4P03905 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.69■□□□□ 0.74
MT-ND4P03905 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND4P03905 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND4P03905 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND4P03905 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND4P03905 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.69■□□□□ 0.74
MT-ND4P03905 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND4P03905 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
MT-ND4P03905 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
MT-ND4P03905 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND4P03905 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.68■□□□□ 0.74
MT-ND4P03905 AC127496.7-201ENST00000625110 1798 ntBASIC19.68■□□□□ 0.74
MT-ND4P03905 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND4P03905 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.68■□□□□ 0.74
MT-ND4P03905 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
MT-ND4P03905 RNF126P1-201ENST00000567452 1320 ntBASIC19.68■□□□□ 0.74
MT-ND4P03905 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND4P03905 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND4P03905 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
MT-ND4P03905 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND4P03905 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND4P03905 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND4P03905 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND4P03905 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.67■□□□□ 0.74
MT-ND4P03905 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
MT-ND4P03905 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND4P03905 ANOS2P-203ENST00000472227 1816 ntBASIC19.67■□□□□ 0.74
MT-ND4P03905 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND4P03905 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND4P03905 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND4P03905 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND4P03905 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND4P03905 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.66■□□□□ 0.74
MT-ND4P03905 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.66■□□□□ 0.74
MT-ND4P03905 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND4P03905 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
MT-ND4P03905 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms