Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AC241377.3-202ENST00000626088 1088 ntBASIC25.35■■□□□ 1.65
CD4P01730 AC241585.3-202ENST00000628937 1088 ntBASIC25.35■■□□□ 1.65
CD4P01730 AC245100.8-202ENST00000629247 1058 ntBASIC25.35■■□□□ 1.65
CD4P01730 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
CD4P01730 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CD4P01730 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.35■■□□□ 1.65
CD4P01730 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CD4P01730 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
CD4P01730 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CD4P01730 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.34■■□□□ 1.65
CD4P01730 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.34■■□□□ 1.65
CD4P01730 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CD4P01730 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CD4P01730 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
CD4P01730 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CD4P01730 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CD4P01730 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CD4P01730 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CD4P01730 AC233992.3-201ENST00000607491 485 ntBASIC25.33■■□□□ 1.65
CD4P01730 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.33■■□□□ 1.65
CD4P01730 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CD4P01730 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CD4P01730 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
CD4P01730 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CD4P01730 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CD4P01730 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.32■■□□□ 1.64
CD4P01730 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CD4P01730 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.32■■□□□ 1.64
CD4P01730 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.32■■□□□ 1.64
CD4P01730 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.32■■□□□ 1.64
CD4P01730 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CD4P01730 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CD4P01730 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CD4P01730 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CD4P01730 BX842568.3-201ENST00000418104 571 ntBASIC25.31■■□□□ 1.64
CD4P01730 AC006455.2-201ENST00000429931 906 ntBASIC25.31■■□□□ 1.64
CD4P01730 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.31■■□□□ 1.64
CD4P01730 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CD4P01730 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.31■■□□□ 1.64
CD4P01730 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.3■■□□□ 1.64
CD4P01730 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CD4P01730 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.3■■□□□ 1.64
CD4P01730 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CD4P01730 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
CD4P01730 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.29■■□□□ 1.64
CD4P01730 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CD4P01730 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.29■■□□□ 1.64
CD4P01730 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CD4P01730 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CD4P01730 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.29■■□□□ 1.64
CD4P01730 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CD4P01730 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.29■■□□□ 1.64
CD4P01730 RARRES2P11-201ENST00000635158 484 ntBASIC25.29■■□□□ 1.64
CD4P01730 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CD4P01730 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC25.28■■□□□ 1.64
CD4P01730 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CD4P01730 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CD4P01730 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CD4P01730 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.28■■□□□ 1.64
CD4P01730 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
CD4P01730 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CD4P01730 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.27■■□□□ 1.64
CD4P01730 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
CD4P01730 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CD4P01730 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CD4P01730 AC034268.1-201ENST00000441047 882 ntBASIC25.27■■□□□ 1.64
CD4P01730 AC090192.1-201ENST00000517740 490 ntBASIC25.27■■□□□ 1.64
CD4P01730 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.27■■□□□ 1.64
CD4P01730 MIR3181-201ENST00000578512 73 ntBASIC25.27■■□□□ 1.64
CD4P01730 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
CD4P01730 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CD4P01730 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CD4P01730 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CD4P01730 SLC6A10P-202ENST00000431994 2058 ntBASIC25.26■■□□□ 1.63
CD4P01730 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
CD4P01730 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CD4P01730 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CD4P01730 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CD4P01730 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.25■■□□□ 1.63
CD4P01730 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.25■■□□□ 1.63
CD4P01730 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.25■■□□□ 1.63
CD4P01730 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
CD4P01730 AC022517.1-201ENST00000592429 346 ntBASIC25.25■■□□□ 1.63
CD4P01730 IKBKGP1-201ENST00000612193 1073 ntBASIC25.25■■□□□ 1.63
CD4P01730 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.25■■□□□ 1.63
CD4P01730 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CD4P01730 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
CD4P01730 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.24■■□□□ 1.63
CD4P01730 AL022069.1-201ENST00000568025 1636 ntBASIC25.24■■□□□ 1.63
CD4P01730 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.24■■□□□ 1.63
CD4P01730 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.24■■□□□ 1.63
CD4P01730 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CD4P01730 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CD4P01730 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CD4P01730 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.24■■□□□ 1.63
CD4P01730 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.24■■□□□ 1.63
CD4P01730 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.24■■□□□ 1.63
CD4P01730 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CD4P01730 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CD4P01730 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms