Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SSX4O60224 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.5■□□□□ 0.87
SSX4O60224 AC233723.2-201ENST00000623798 2106 ntBASIC20.5■□□□□ 0.87
SSX4O60224 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSX4O60224 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSX4O60224 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.49■□□□□ 0.87
SSX4O60224 C1orf229-201ENST00000623686 2258 ntBASIC20.49■□□□□ 0.87
SSX4O60224 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSX4O60224 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSX4O60224 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSX4O60224 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
SSX4O60224 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSX4O60224 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SSX4O60224 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.48■□□□□ 0.87
SSX4O60224 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.48■□□□□ 0.87
SSX4O60224 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSX4O60224 GUSBP5-201ENST00000418136 578 ntBASIC20.48■□□□□ 0.87
SSX4O60224 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SSX4O60224 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
SSX4O60224 RPS2P7-201ENST00000447334 885 ntBASIC20.48■□□□□ 0.87
SSX4O60224 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SSX4O60224 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSX4O60224 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSX4O60224 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SSX4O60224 AC007375.3-201ENST00000600936 2314 ntBASIC20.48■□□□□ 0.87
SSX4O60224 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSX4O60224 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSX4O60224 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSX4O60224 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSX4O60224 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.47■□□□□ 0.87
SSX4O60224 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSX4O60224 AC019171.1-201ENST00000601251 1056 ntBASIC20.47■□□□□ 0.87
SSX4O60224 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SSX4O60224 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSX4O60224 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SSX4O60224 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SSX4O60224 AC141586.4-201ENST00000624558 1573 ntBASIC20.46■□□□□ 0.87
SSX4O60224 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSX4O60224 SLC25A24-204ENST00000569674 2357 ntBASIC20.46■□□□□ 0.87
SSX4O60224 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSX4O60224 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSX4O60224 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SSX4O60224 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSX4O60224 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.46■□□□□ 0.87
SSX4O60224 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSX4O60224 AL592295.1-201ENST00000400984 884 ntBASIC20.46■□□□□ 0.87
SSX4O60224 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SSX4O60224 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.46■□□□□ 0.87
SSX4O60224 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SSX4O60224 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SSX4O60224 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSX4O60224 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.87
SSX4O60224 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSX4O60224 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.45■□□□□ 0.86
SSX4O60224 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SSX4O60224 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
SSX4O60224 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.45■□□□□ 0.86
SSX4O60224 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.45■□□□□ 0.86
SSX4O60224 THA1P-201ENST00000590384 1145 ntBASIC20.45■□□□□ 0.86
SSX4O60224 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.45■□□□□ 0.86
SSX4O60224 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SSX4O60224 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.45■□□□□ 0.86
SSX4O60224 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SSX4O60224 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSX4O60224 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SSX4O60224 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SSX4O60224 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.44■□□□□ 0.86
SSX4O60224 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SSX4O60224 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSX4O60224 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
SSX4O60224 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSX4O60224 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.44■□□□□ 0.86
SSX4O60224 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SSX4O60224 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.44■□□□□ 0.86
SSX4O60224 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SSX4O60224 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSX4O60224 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.44■□□□□ 0.86
SSX4O60224 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSX4O60224 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSX4O60224 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSX4O60224 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SSX4O60224 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSX4O60224 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
SSX4O60224 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSX4O60224 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSX4O60224 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSX4O60224 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSX4O60224 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSX4O60224 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.43■□□□□ 0.86
SSX4O60224 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSX4O60224 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSX4O60224 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSX4O60224 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSX4O60224 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.43■□□□□ 0.86
SSX4O60224 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.43■□□□□ 0.86
SSX4O60224 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SSX4O60224 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSX4O60224 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSX4O60224 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSX4O60224 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms