Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PRICKLE3O43900 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PRICKLE3O43900 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PRICKLE3O43900 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PRICKLE3O43900 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PRICKLE3O43900 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
PRICKLE3O43900 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PRICKLE3O43900 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.96■■□□□ 1.11
PRICKLE3O43900 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRICKLE3O43900 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PRICKLE3O43900 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRICKLE3O43900 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.96■■□□□ 1.11
PRICKLE3O43900 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.96■■□□□ 1.11
PRICKLE3O43900 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.96■■□□□ 1.11
PRICKLE3O43900 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PRICKLE3O43900 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE3O43900 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE3O43900 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.95■■□□□ 1.1
PRICKLE3O43900 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PRICKLE3O43900 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.95■■□□□ 1.1
PRICKLE3O43900 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE3O43900 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE3O43900 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE3O43900 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PRICKLE3O43900 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE3O43900 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PRICKLE3O43900 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE3O43900 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
PRICKLE3O43900 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRICKLE3O43900 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.94■■□□□ 1.1
PRICKLE3O43900 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.94■■□□□ 1.1
PRICKLE3O43900 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.94■■□□□ 1.1
PRICKLE3O43900 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.94■■□□□ 1.1
PRICKLE3O43900 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRICKLE3O43900 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRICKLE3O43900 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.94■■□□□ 1.1
PRICKLE3O43900 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRICKLE3O43900 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRICKLE3O43900 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRICKLE3O43900 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRICKLE3O43900 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PRICKLE3O43900 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRICKLE3O43900 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.93■■□□□ 1.1
PRICKLE3O43900 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRICKLE3O43900 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRICKLE3O43900 AC093323.1-202ENST00000635031 2045 ntBASIC21.92■■□□□ 1.1
PRICKLE3O43900 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRICKLE3O43900 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PRICKLE3O43900 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PRICKLE3O43900 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRICKLE3O43900 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.92■■□□□ 1.1
PRICKLE3O43900 AL356740.2-201ENST00000601559 647 ntBASIC21.92■■□□□ 1.1
PRICKLE3O43900 AC131212.1-201ENST00000613771 668 ntBASIC21.92■■□□□ 1.1
PRICKLE3O43900 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRICKLE3O43900 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRICKLE3O43900 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.91■■□□□ 1.1
PRICKLE3O43900 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRICKLE3O43900 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PRICKLE3O43900 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRICKLE3O43900 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.91■■□□□ 1.1
PRICKLE3O43900 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.91■■□□□ 1.1
PRICKLE3O43900 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
PRICKLE3O43900 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRICKLE3O43900 ABCB10P4-201ENST00000566803 2184 ntBASIC21.9■■□□□ 1.1
PRICKLE3O43900 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.9■■□□□ 1.1
PRICKLE3O43900 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.9■■□□□ 1.1
PRICKLE3O43900 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.9■■□□□ 1.1
PRICKLE3O43900 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PRICKLE3O43900 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRICKLE3O43900 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PRICKLE3O43900 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PRICKLE3O43900 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.9■■□□□ 1.1
PRICKLE3O43900 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRICKLE3O43900 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.89■■□□□ 1.1
PRICKLE3O43900 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PRICKLE3O43900 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
PRICKLE3O43900 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.89■■□□□ 1.09
PRICKLE3O43900 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PRICKLE3O43900 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.89■■□□□ 1.09
PRICKLE3O43900 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PRICKLE3O43900 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.89■■□□□ 1.09
PRICKLE3O43900 AL512631.2-201ENST00000604634 923 ntBASIC21.89■■□□□ 1.09
PRICKLE3O43900 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PRICKLE3O43900 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.88■■□□□ 1.09
PRICKLE3O43900 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRICKLE3O43900 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.88■■□□□ 1.09
PRICKLE3O43900 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.88■■□□□ 1.09
PRICKLE3O43900 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.88■■□□□ 1.09
PRICKLE3O43900 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.88■■□□□ 1.09
PRICKLE3O43900 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRICKLE3O43900 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRICKLE3O43900 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRICKLE3O43900 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRICKLE3O43900 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRICKLE3O43900 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRICKLE3O43900 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRICKLE3O43900 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PRICKLE3O43900 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PRICKLE3O43900 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PRICKLE3O43900 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms