Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRAF3IP2O43734 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAF3IP2O43734 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAF3IP2O43734 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAF3IP2O43734 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAF3IP2O43734 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRAF3IP2O43734 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.31■□□□□ 0.84
TRAF3IP2O43734 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.31■□□□□ 0.84
TRAF3IP2O43734 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.31■□□□□ 0.84
TRAF3IP2O43734 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.31■□□□□ 0.84
TRAF3IP2O43734 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TRAF3IP2O43734 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAF3IP2O43734 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAF3IP2O43734 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAF3IP2O43734 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.3■□□□□ 0.84
TRAF3IP2O43734 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.3■□□□□ 0.84
TRAF3IP2O43734 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAF3IP2O43734 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TRAF3IP2O43734 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
TRAF3IP2O43734 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAF3IP2O43734 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.3■□□□□ 0.84
TRAF3IP2O43734 AC239859.2-201ENST00000444165 318 ntBASIC20.3■□□□□ 0.84
TRAF3IP2O43734 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.3■□□□□ 0.84
TRAF3IP2O43734 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRAF3IP2O43734 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRAF3IP2O43734 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAF3IP2O43734 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TRAF3IP2O43734 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAF3IP2O43734 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAF3IP2O43734 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAF3IP2O43734 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAF3IP2O43734 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
TRAF3IP2O43734 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAF3IP2O43734 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAF3IP2O43734 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAF3IP2O43734 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAF3IP2O43734 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.29■□□□□ 0.84
TRAF3IP2O43734 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.29■□□□□ 0.84
TRAF3IP2O43734 MIR4787-201ENST00000607364 84 ntBASIC20.29■□□□□ 0.84
TRAF3IP2O43734 AC092028.1-203ENST00000608262 953 ntBASIC20.29■□□□□ 0.84
TRAF3IP2O43734 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.29■□□□□ 0.84
TRAF3IP2O43734 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAF3IP2O43734 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.29■□□□□ 0.84
TRAF3IP2O43734 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAF3IP2O43734 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAF3IP2O43734 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TRAF3IP2O43734 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAF3IP2O43734 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAF3IP2O43734 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAF3IP2O43734 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.28■□□□□ 0.84
TRAF3IP2O43734 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.28■□□□□ 0.84
TRAF3IP2O43734 AL035685.1-201ENST00000636663 812 ntBASIC20.28■□□□□ 0.84
TRAF3IP2O43734 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.28■□□□□ 0.84
TRAF3IP2O43734 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAF3IP2O43734 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAF3IP2O43734 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAF3IP2O43734 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TRAF3IP2O43734 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF3IP2O43734 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF3IP2O43734 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF3IP2O43734 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF3IP2O43734 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF3IP2O43734 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRAF3IP2O43734 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.27■□□□□ 0.83
TRAF3IP2O43734 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.26■□□□□ 0.83
TRAF3IP2O43734 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF3IP2O43734 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF3IP2O43734 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRAF3IP2O43734 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
TRAF3IP2O43734 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF3IP2O43734 MIR6722-201ENST00000617286 78 ntBASIC20.26■□□□□ 0.83
TRAF3IP2O43734 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.26■□□□□ 0.83
TRAF3IP2O43734 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF3IP2O43734 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF3IP2O43734 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF3IP2O43734 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF3IP2O43734 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF3IP2O43734 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF3IP2O43734 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF3IP2O43734 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRAF3IP2O43734 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF3IP2O43734 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
TRAF3IP2O43734 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.25■□□□□ 0.83
TRAF3IP2O43734 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TRAF3IP2O43734 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TRAF3IP2O43734 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF3IP2O43734 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF3IP2O43734 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF3IP2O43734 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.24■□□□□ 0.83
TRAF3IP2O43734 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.24■□□□□ 0.83
TRAF3IP2O43734 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF3IP2O43734 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF3IP2O43734 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF3IP2O43734 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.24■□□□□ 0.83
TRAF3IP2O43734 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF3IP2O43734 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.24■□□□□ 0.83
TRAF3IP2O43734 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF3IP2O43734 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TRAF3IP2O43734 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF3IP2O43734 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms