Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDLIM1O00151 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDLIM1O00151 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PDLIM1O00151 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.56■■□□□ 1.04
PDLIM1O00151 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.56■■□□□ 1.04
PDLIM1O00151 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM1O00151 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.56■■□□□ 1.04
PDLIM1O00151 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM1O00151 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PDLIM1O00151 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM1O00151 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
PDLIM1O00151 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.56■■□□□ 1.04
PDLIM1O00151 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.56■■□□□ 1.04
PDLIM1O00151 MIR3960-201ENST00000583311 91 ntBASIC21.56■■□□□ 1.04
PDLIM1O00151 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM1O00151 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM1O00151 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM1O00151 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM1O00151 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PDLIM1O00151 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM1O00151 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.55■■□□□ 1.04
PDLIM1O00151 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PDLIM1O00151 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.55■■□□□ 1.04
PDLIM1O00151 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM1O00151 RP9P-202ENST00000450133 1212 ntBASIC21.55■■□□□ 1.04
PDLIM1O00151 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM1O00151 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PDLIM1O00151 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.55■■□□□ 1.04
PDLIM1O00151 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM1O00151 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM1O00151 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM1O00151 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PDLIM1O00151 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.54■■□□□ 1.04
PDLIM1O00151 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM1O00151 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM1O00151 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PDLIM1O00151 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM1O00151 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM1O00151 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM1O00151 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM1O00151 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.54■■□□□ 1.04
PDLIM1O00151 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM1O00151 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.54■■□□□ 1.04
PDLIM1O00151 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM1O00151 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PDLIM1O00151 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PDLIM1O00151 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM1O00151 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM1O00151 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PDLIM1O00151 AC092667.1-201ENST00000434301 2586 ntBASIC21.52■■□□□ 1.04
PDLIM1O00151 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM1O00151 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM1O00151 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM1O00151 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM1O00151 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM1O00151 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM1O00151 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM1O00151 NTF6A-201ENST00000591175 560 ntBASIC21.52■■□□□ 1.04
PDLIM1O00151 U85056.1-201ENST00000616429 682 ntBASIC21.52■■□□□ 1.04
PDLIM1O00151 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM1O00151 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM1O00151 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM1O00151 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PDLIM1O00151 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
PDLIM1O00151 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM1O00151 AC007375.3-201ENST00000600936 2314 ntBASIC21.51■■□□□ 1.03
PDLIM1O00151 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM1O00151 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM1O00151 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.51■■□□□ 1.03
PDLIM1O00151 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM1O00151 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM1O00151 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PDLIM1O00151 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM1O00151 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM1O00151 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM1O00151 AC026202.3-201ENST00000600805 1127 ntBASIC21.51■■□□□ 1.03
PDLIM1O00151 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.51■■□□□ 1.03
PDLIM1O00151 DUSP8P3-201ENST00000399571 1760 ntBASIC21.51■■□□□ 1.03
PDLIM1O00151 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM1O00151 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM1O00151 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM1O00151 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM1O00151 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM1O00151 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM1O00151 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM1O00151 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.5■■□□□ 1.03
PDLIM1O00151 AC009831.1-201ENST00000580420 1582 ntBASIC21.5■■□□□ 1.03
PDLIM1O00151 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM1O00151 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PDLIM1O00151 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PDLIM1O00151 AC093536.1-201ENST00000569153 554 ntBASIC21.5■■□□□ 1.03
PDLIM1O00151 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM1O00151 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM1O00151 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM1O00151 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
PDLIM1O00151 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM1O00151 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.5■■□□□ 1.03
PDLIM1O00151 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM1O00151 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.49■■□□□ 1.03
PDLIM1O00151 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms