Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LYRM9A8MSI8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
LYRM9A8MSI8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LYRM9A8MSI8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYRM9A8MSI8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYRM9A8MSI8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.26■□□□□ 0.19
LYRM9A8MSI8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.26■□□□□ 0.19
LYRM9A8MSI8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LYRM9A8MSI8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYRM9A8MSI8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.25■□□□□ 0.19
LYRM9A8MSI8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
LYRM9A8MSI8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LYRM9A8MSI8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LYRM9A8MSI8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYRM9A8MSI8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LYRM9A8MSI8 AL356740.2-201ENST00000601559 647 ntBASIC16.25■□□□□ 0.19
LYRM9A8MSI8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.25■□□□□ 0.19
LYRM9A8MSI8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
LYRM9A8MSI8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYRM9A8MSI8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.25■□□□□ 0.19
LYRM9A8MSI8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC16.25■□□□□ 0.19
LYRM9A8MSI8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LYRM9A8MSI8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LYRM9A8MSI8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYRM9A8MSI8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LYRM9A8MSI8 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.24■□□□□ 0.19
LYRM9A8MSI8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.24■□□□□ 0.19
LYRM9A8MSI8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYRM9A8MSI8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.24■□□□□ 0.19
LYRM9A8MSI8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYRM9A8MSI8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LYRM9A8MSI8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYRM9A8MSI8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYRM9A8MSI8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LYRM9A8MSI8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LYRM9A8MSI8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYRM9A8MSI8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYRM9A8MSI8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYRM9A8MSI8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYRM9A8MSI8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYRM9A8MSI8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYRM9A8MSI8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.22■□□□□ 0.19
LYRM9A8MSI8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.22■□□□□ 0.19
LYRM9A8MSI8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.22■□□□□ 0.19
LYRM9A8MSI8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.22■□□□□ 0.19
LYRM9A8MSI8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.22■□□□□ 0.19
LYRM9A8MSI8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.22■□□□□ 0.19
LYRM9A8MSI8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYRM9A8MSI8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYRM9A8MSI8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LYRM9A8MSI8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LYRM9A8MSI8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.22■□□□□ 0.19
LYRM9A8MSI8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYRM9A8MSI8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYRM9A8MSI8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYRM9A8MSI8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.21■□□□□ 0.19
LYRM9A8MSI8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LYRM9A8MSI8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LYRM9A8MSI8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYRM9A8MSI8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYRM9A8MSI8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.21■□□□□ 0.19
LYRM9A8MSI8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYRM9A8MSI8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.21■□□□□ 0.19
LYRM9A8MSI8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.21■□□□□ 0.19
LYRM9A8MSI8 AL117332.1-201ENST00000622628 974 ntBASIC16.21■□□□□ 0.19
LYRM9A8MSI8 AC004812.2-201ENST00000611079 2094 ntBASIC16.21■□□□□ 0.19
LYRM9A8MSI8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.21■□□□□ 0.19
LYRM9A8MSI8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYRM9A8MSI8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYRM9A8MSI8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LYRM9A8MSI8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYRM9A8MSI8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYRM9A8MSI8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LYRM9A8MSI8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.2■□□□□ 0.18
LYRM9A8MSI8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LYRM9A8MSI8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LYRM9A8MSI8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.2■□□□□ 0.18
LYRM9A8MSI8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYRM9A8MSI8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.2■□□□□ 0.18
LYRM9A8MSI8 MIR3621-201ENST00000580529 85 ntBASIC16.2■□□□□ 0.18
LYRM9A8MSI8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.2■□□□□ 0.18
LYRM9A8MSI8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LYRM9A8MSI8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LYRM9A8MSI8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LYRM9A8MSI8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYRM9A8MSI8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYRM9A8MSI8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYRM9A8MSI8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYRM9A8MSI8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYRM9A8MSI8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYRM9A8MSI8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LYRM9A8MSI8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.19■□□□□ 0.18
LYRM9A8MSI8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYRM9A8MSI8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LYRM9A8MSI8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LYRM9A8MSI8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYRM9A8MSI8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
LYRM9A8MSI8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.18■□□□□ 0.18
LYRM9A8MSI8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYRM9A8MSI8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms