Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01546A6NGU7 AP006261.1-201ENST00000584783 668 ntBASIC16.21■□□□□ 0.19
LINC01546A6NGU7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.21■□□□□ 0.19
LINC01546A6NGU7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LINC01546A6NGU7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01546A6NGU7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
LINC01546A6NGU7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LINC01546A6NGU7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
LINC01546A6NGU7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC01546A6NGU7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC01546A6NGU7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC01546A6NGU7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01546A6NGU7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01546A6NGU7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01546A6NGU7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01546A6NGU7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01546A6NGU7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC01546A6NGU7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.2■□□□□ 0.18
LINC01546A6NGU7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC01546A6NGU7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01546A6NGU7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01546A6NGU7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC01546A6NGU7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
LINC01546A6NGU7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01546A6NGU7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01546A6NGU7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
LINC01546A6NGU7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC01546A6NGU7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01546A6NGU7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC01546A6NGU7 DUX4L13-201ENST00000554103 1267 ntBASIC16.19■□□□□ 0.18
LINC01546A6NGU7 AC044849.2-201ENST00000606596 710 ntBASIC16.19■□□□□ 0.18
LINC01546A6NGU7 DUX4L15-201ENST00000611059 1267 ntBASIC16.19■□□□□ 0.18
LINC01546A6NGU7 DUX4L23-201ENST00000615195 1269 ntBASIC16.19■□□□□ 0.18
LINC01546A6NGU7 DUX4L24-201ENST00000617576 1269 ntBASIC16.19■□□□□ 0.18
LINC01546A6NGU7 DUX4L22-201ENST00000618238 1269 ntBASIC16.19■□□□□ 0.18
LINC01546A6NGU7 DUX4L20-201ENST00000619712 1269 ntBASIC16.19■□□□□ 0.18
LINC01546A6NGU7 DUX4L21-201ENST00000622058 1269 ntBASIC16.19■□□□□ 0.18
LINC01546A6NGU7 DUX4L10-201ENST00000622460 1267 ntBASIC16.19■□□□□ 0.18
LINC01546A6NGU7 DUX4L25-201ENST00000624915 1269 ntBASIC16.19■□□□□ 0.18
LINC01546A6NGU7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01546A6NGU7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01546A6NGU7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01546A6NGU7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01546A6NGU7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01546A6NGU7 DUX4L29-201ENST00000425409 679 ntBASIC16.18■□□□□ 0.18
LINC01546A6NGU7 HLA-V-202ENST00000446817 847 ntBASIC16.18■□□□□ 0.18
LINC01546A6NGU7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.18■□□□□ 0.18
LINC01546A6NGU7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01546A6NGU7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01546A6NGU7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01546A6NGU7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01546A6NGU7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01546A6NGU7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01546A6NGU7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01546A6NGU7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.18■□□□□ 0.18
LINC01546A6NGU7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LINC01546A6NGU7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01546A6NGU7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01546A6NGU7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01546A6NGU7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC01546A6NGU7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01546A6NGU7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01546A6NGU7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01546A6NGU7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC01546A6NGU7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
LINC01546A6NGU7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01546A6NGU7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC01546A6NGU7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC01546A6NGU7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01546A6NGU7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01546A6NGU7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01546A6NGU7 AL121603.2-201ENST00000557373 2117 ntBASIC16.16■□□□□ 0.18
LINC01546A6NGU7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01546A6NGU7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LINC01546A6NGU7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LINC01546A6NGU7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01546A6NGU7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01546A6NGU7 FBXW4P1-201ENST00000426721 2239 ntBASIC16.15■□□□□ 0.18
LINC01546A6NGU7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01546A6NGU7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01546A6NGU7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01546A6NGU7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01546A6NGU7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.15■□□□□ 0.18
LINC01546A6NGU7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LINC01546A6NGU7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01546A6NGU7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01546A6NGU7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.15■□□□□ 0.18
LINC01546A6NGU7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01546A6NGU7 LINC01971-201ENST00000617888 1048 ntBASIC16.15■□□□□ 0.18
LINC01546A6NGU7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.15■□□□□ 0.18
LINC01546A6NGU7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01546A6NGU7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01546A6NGU7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
LINC01546A6NGU7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01546A6NGU7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01546A6NGU7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01546A6NGU7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LINC01546A6NGU7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01546A6NGU7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01546A6NGU7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms