Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.2■□□□□ 0.82
MBD3L4A6NDZ8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3L4A6NDZ8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3L4A6NDZ8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3L4A6NDZ8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.2■□□□□ 0.82
MBD3L4A6NDZ8 AC241377.3-202ENST00000626088 1088 ntBASIC20.2■□□□□ 0.82
MBD3L4A6NDZ8 AC241585.3-202ENST00000628937 1088 ntBASIC20.2■□□□□ 0.82
MBD3L4A6NDZ8 AC245100.8-202ENST00000629247 1058 ntBASIC20.2■□□□□ 0.82
MBD3L4A6NDZ8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3L4A6NDZ8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3L4A6NDZ8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3L4A6NDZ8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
MBD3L4A6NDZ8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MBD3L4A6NDZ8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MBD3L4A6NDZ8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MBD3L4A6NDZ8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MBD3L4A6NDZ8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MBD3L4A6NDZ8 AL138724.1-201ENST00000606771 1088 ntBASIC20.19■□□□□ 0.82
MBD3L4A6NDZ8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.19■□□□□ 0.82
MBD3L4A6NDZ8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.18■□□□□ 0.82
MBD3L4A6NDZ8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD3L4A6NDZ8 SERBP1P1-201ENST00000396021 1160 ntBASIC20.18■□□□□ 0.82
MBD3L4A6NDZ8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
MBD3L4A6NDZ8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD3L4A6NDZ8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
MBD3L4A6NDZ8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD3L4A6NDZ8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD3L4A6NDZ8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3L4A6NDZ8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3L4A6NDZ8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
MBD3L4A6NDZ8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.17■□□□□ 0.82
MBD3L4A6NDZ8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3L4A6NDZ8 AC142381.3-201ENST00000568208 1670 ntBASIC20.17■□□□□ 0.82
MBD3L4A6NDZ8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3L4A6NDZ8 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.17■□□□□ 0.82
MBD3L4A6NDZ8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.17■□□□□ 0.82
MBD3L4A6NDZ8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
MBD3L4A6NDZ8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
MBD3L4A6NDZ8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3L4A6NDZ8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3L4A6NDZ8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MBD3L4A6NDZ8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3L4A6NDZ8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3L4A6NDZ8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3L4A6NDZ8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3L4A6NDZ8 AC011298.3-201ENST00000615796 283 ntBASIC20.16■□□□□ 0.82
MBD3L4A6NDZ8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.16■□□□□ 0.82
MBD3L4A6NDZ8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.16■□□□□ 0.82
MBD3L4A6NDZ8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3L4A6NDZ8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3L4A6NDZ8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
MBD3L4A6NDZ8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MBD3L4A6NDZ8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.15■□□□□ 0.82
MBD3L4A6NDZ8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD3L4A6NDZ8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD3L4A6NDZ8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
MBD3L4A6NDZ8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.15■□□□□ 0.82
MBD3L4A6NDZ8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.15■□□□□ 0.82
MBD3L4A6NDZ8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.15■□□□□ 0.82
MBD3L4A6NDZ8 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.15■□□□□ 0.82
MBD3L4A6NDZ8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD3L4A6NDZ8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD3L4A6NDZ8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.15■□□□□ 0.82
MBD3L4A6NDZ8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD3L4A6NDZ8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.15■□□□□ 0.82
MBD3L4A6NDZ8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD3L4A6NDZ8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MBD3L4A6NDZ8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
MBD3L4A6NDZ8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.14■□□□□ 0.81
MBD3L4A6NDZ8 MIR4767-201ENST00000582827 78 ntBASIC20.14■□□□□ 0.81
MBD3L4A6NDZ8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3L4A6NDZ8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.13■□□□□ 0.81
MBD3L4A6NDZ8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3L4A6NDZ8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3L4A6NDZ8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.13■□□□□ 0.81
MBD3L4A6NDZ8 MIR939-201ENST00000401314 82 ntBASIC20.13■□□□□ 0.81
MBD3L4A6NDZ8 AP001330.3-201ENST00000520123 633 ntBASIC20.13■□□□□ 0.81
MBD3L4A6NDZ8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.13■□□□□ 0.81
MBD3L4A6NDZ8 AF213884.3-201ENST00000563833 479 ntBASIC20.13■□□□□ 0.81
MBD3L4A6NDZ8 AL136967.2-201ENST00000623968 743 ntBASIC20.13■□□□□ 0.81
MBD3L4A6NDZ8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
MBD3L4A6NDZ8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3L4A6NDZ8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3L4A6NDZ8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3L4A6NDZ8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.13■□□□□ 0.81
MBD3L4A6NDZ8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3L4A6NDZ8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD3L4A6NDZ8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.13■□□□□ 0.81
MBD3L4A6NDZ8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3L4A6NDZ8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3L4A6NDZ8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3L4A6NDZ8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3L4A6NDZ8 ZNRF2P3-201ENST00000424200 374 ntBASIC20.12■□□□□ 0.81
MBD3L4A6NDZ8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3L4A6NDZ8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.12■□□□□ 0.81
MBD3L4A6NDZ8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3L4A6NDZ8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3L4A6NDZ8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3L4A6NDZ8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD3L4A6NDZ8 AC138932.3-201ENST00000567634 1902 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms