Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 ALDH1A3-203ENST00000557963 1670 ntBASIC33.1■■■□□ 2.89
CCDC144AA2RUR9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CCDC144AA2RUR9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CCDC144AA2RUR9 PTCHD3P2-201ENST00000424937 1205 ntBASIC33.1■■■□□ 2.89
CCDC144AA2RUR9 AC099791.2-201ENST00000605725 427 ntBASIC33.1■■■□□ 2.89
CCDC144AA2RUR9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC33.1■■■□□ 2.89
CCDC144AA2RUR9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC33.09■■■□□ 2.89
CCDC144AA2RUR9 SYT6-210ENST00000641643 1587 ntBASIC33.09■■■□□ 2.89
CCDC144AA2RUR9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC33.09■■■□□ 2.89
CCDC144AA2RUR9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC33.09■■■□□ 2.89
CCDC144AA2RUR9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CCDC144AA2RUR9 SERBP1P1-201ENST00000396021 1160 ntBASIC33.09■■■□□ 2.89
CCDC144AA2RUR9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CCDC144AA2RUR9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC33.09■■■□□ 2.89
CCDC144AA2RUR9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
CCDC144AA2RUR9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC33.08■■■□□ 2.89
CCDC144AA2RUR9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CCDC144AA2RUR9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CCDC144AA2RUR9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC33.08■■■□□ 2.89
CCDC144AA2RUR9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC33.08■■■□□ 2.89
CCDC144AA2RUR9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.89
CCDC144AA2RUR9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CCDC144AA2RUR9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CCDC144AA2RUR9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CCDC144AA2RUR9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC33.07■■■□□ 2.88
CCDC144AA2RUR9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CCDC144AA2RUR9 AP001330.3-201ENST00000520123 633 ntBASIC33.07■■■□□ 2.88
CCDC144AA2RUR9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CCDC144AA2RUR9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CCDC144AA2RUR9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CCDC144AA2RUR9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
CCDC144AA2RUR9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC33.06■■■□□ 2.88
CCDC144AA2RUR9 AC142381.3-201ENST00000568208 1670 ntBASIC33.06■■■□□ 2.88
CCDC144AA2RUR9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CCDC144AA2RUR9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC33.05■■■□□ 2.88
CCDC144AA2RUR9 ZNRF2P3-201ENST00000424200 374 ntBASIC33.05■■■□□ 2.88
CCDC144AA2RUR9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC33.05■■■□□ 2.88
CCDC144AA2RUR9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC33.05■■■□□ 2.88
CCDC144AA2RUR9 AL355001.2-201ENST00000620617 1191 ntBASIC33.05■■■□□ 2.88
CCDC144AA2RUR9 AC138932.3-201ENST00000567634 1902 ntBASIC33.05■■■□□ 2.88
CCDC144AA2RUR9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
CCDC144AA2RUR9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC33.05■■■□□ 2.88
CCDC144AA2RUR9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CCDC144AA2RUR9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC33.04■■■□□ 2.88
CCDC144AA2RUR9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC33.04■■■□□ 2.88
CCDC144AA2RUR9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CCDC144AA2RUR9 MIR4767-201ENST00000582827 78 ntBASIC33.04■■■□□ 2.88
CCDC144AA2RUR9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CCDC144AA2RUR9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CCDC144AA2RUR9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC33.03■■■□□ 2.88
CCDC144AA2RUR9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
CCDC144AA2RUR9 AF213884.3-201ENST00000563833 479 ntBASIC33.03■■■□□ 2.88
CCDC144AA2RUR9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
CCDC144AA2RUR9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
CCDC144AA2RUR9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
CCDC144AA2RUR9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC33.03■■■□□ 2.88
CCDC144AA2RUR9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
CCDC144AA2RUR9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
CCDC144AA2RUR9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CCDC144AA2RUR9 MIR939-201ENST00000401314 82 ntBASIC33.02■■■□□ 2.88
CCDC144AA2RUR9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CCDC144AA2RUR9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC33.02■■■□□ 2.88
CCDC144AA2RUR9 GRAMD4P4-201ENST00000613563 1115 ntBASIC33.02■■■□□ 2.88
CCDC144AA2RUR9 AC011298.3-201ENST00000615796 283 ntBASIC33.02■■■□□ 2.88
CCDC144AA2RUR9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CCDC144AA2RUR9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC33.02■■■□□ 2.88
CCDC144AA2RUR9 AC006455.2-201ENST00000429931 906 ntBASIC33.02■■■□□ 2.88
CCDC144AA2RUR9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CCDC144AA2RUR9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC33.01■■■□□ 2.88
CCDC144AA2RUR9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CCDC144AA2RUR9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
CCDC144AA2RUR9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC33.01■■■□□ 2.87
CCDC144AA2RUR9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC33.01■■■□□ 2.87
CCDC144AA2RUR9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC33.01■■■□□ 2.87
CCDC144AA2RUR9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
CCDC144AA2RUR9 AL138724.1-201ENST00000606771 1088 ntBASIC33.01■■■□□ 2.87
CCDC144AA2RUR9 AC241377.3-202ENST00000626088 1088 ntBASIC33.01■■■□□ 2.87
CCDC144AA2RUR9 AC241585.3-202ENST00000628937 1088 ntBASIC33.01■■■□□ 2.87
CCDC144AA2RUR9 AC245100.8-202ENST00000629247 1058 ntBASIC33.01■■■□□ 2.87
CCDC144AA2RUR9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
CCDC144AA2RUR9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC33■■■□□ 2.87
CCDC144AA2RUR9 AC135731.1-201ENST00000569415 2548 ntBASIC33■■■□□ 2.87
CCDC144AA2RUR9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC33■■■□□ 2.87
CCDC144AA2RUR9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC33■■■□□ 2.87
CCDC144AA2RUR9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
CCDC144AA2RUR9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC33■■■□□ 2.87
CCDC144AA2RUR9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
CCDC144AA2RUR9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC32.99■■■□□ 2.87
CCDC144AA2RUR9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CCDC144AA2RUR9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC32.99■■■□□ 2.87
CCDC144AA2RUR9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC32.98■■■□□ 2.87
CCDC144AA2RUR9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC32.98■■■□□ 2.87
CCDC144AA2RUR9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
CCDC144AA2RUR9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
CCDC144AA2RUR9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC32.98■■■□□ 2.87
CCDC144AA2RUR9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
CCDC144AA2RUR9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
CCDC144AA2RUR9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
CCDC144AA2RUR9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC32.97■■■□□ 2.87
CCDC144AA2RUR9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms