Protein–RNA interactions for Protein: A0A0K0K1A5

TRBV6-5, T-cell receptor beta variable 6-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-5A0A0K0K1A5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-5A0A0K0K1A5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-5A0A0K0K1A5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBV6-5A0A0K0K1A5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.17■□□□□ 0.18
TRBV6-5A0A0K0K1A5 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV6-5A0A0K0K1A5 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-5A0A0K0K1A5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-5A0A0K0K1A5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRBV6-5A0A0K0K1A5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-5A0A0K0K1A5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV6-5A0A0K0K1A5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-5A0A0K0K1A5 AC137767.1-201ENST00000602918 1920 ntBASIC16.17■□□□□ 0.18
TRBV6-5A0A0K0K1A5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-5A0A0K0K1A5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-5A0A0K0K1A5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-5A0A0K0K1A5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRBV6-5A0A0K0K1A5 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-5A0A0K0K1A5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-5A0A0K0K1A5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-5A0A0K0K1A5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-5A0A0K0K1A5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-5A0A0K0K1A5 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.16■□□□□ 0.18
TRBV6-5A0A0K0K1A5 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-5A0A0K0K1A5 SRP68-213ENST00000629930 165 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBV6-5A0A0K0K1A5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.16■□□□□ 0.18
TRBV6-5A0A0K0K1A5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-5A0A0K0K1A5 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-5A0A0K0K1A5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-5A0A0K0K1A5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TRBV6-5A0A0K0K1A5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-5A0A0K0K1A5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-5A0A0K0K1A5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRBV6-5A0A0K0K1A5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-5A0A0K0K1A5 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV6-5A0A0K0K1A5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-5A0A0K0K1A5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-5A0A0K0K1A5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-5A0A0K0K1A5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-5A0A0K0K1A5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRBV6-5A0A0K0K1A5 ESRRAP2-201ENST00000418437 1549 ntBASIC16.14■□□□□ 0.18
TRBV6-5A0A0K0K1A5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
TRBV6-5A0A0K0K1A5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-5A0A0K0K1A5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-5A0A0K0K1A5 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRBV6-5A0A0K0K1A5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRBV6-5A0A0K0K1A5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-5A0A0K0K1A5 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-5A0A0K0K1A5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-5A0A0K0K1A5 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-5A0A0K0K1A5 AL022069.1-201ENST00000568025 1636 ntBASIC16.14■□□□□ 0.17
TRBV6-5A0A0K0K1A5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.14■□□□□ 0.17
TRBV6-5A0A0K0K1A5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-5A0A0K0K1A5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-5A0A0K0K1A5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
TRBV6-5A0A0K0K1A5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.14■□□□□ 0.17
TRBV6-5A0A0K0K1A5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-5A0A0K0K1A5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-5A0A0K0K1A5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-5A0A0K0K1A5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-5A0A0K0K1A5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV6-5A0A0K0K1A5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-5A0A0K0K1A5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.13■□□□□ 0.17
TRBV6-5A0A0K0K1A5 AL592295.1-201ENST00000400984 884 ntBASIC16.13■□□□□ 0.17
TRBV6-5A0A0K0K1A5 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.13■□□□□ 0.17
TRBV6-5A0A0K0K1A5 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-5A0A0K0K1A5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRBV6-5A0A0K0K1A5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRBV6-5A0A0K0K1A5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV6-5A0A0K0K1A5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRBV6-5A0A0K0K1A5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-5A0A0K0K1A5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-5A0A0K0K1A5 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-5A0A0K0K1A5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-5A0A0K0K1A5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-5A0A0K0K1A5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-5A0A0K0K1A5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV6-5A0A0K0K1A5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-5A0A0K0K1A5 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV6-5A0A0K0K1A5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-5A0A0K0K1A5 RPS2P7-201ENST00000447334 885 ntBASIC16.12■□□□□ 0.17
TRBV6-5A0A0K0K1A5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV6-5A0A0K0K1A5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-5A0A0K0K1A5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-5A0A0K0K1A5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-5A0A0K0K1A5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRBV6-5A0A0K0K1A5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-5A0A0K0K1A5 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-5A0A0K0K1A5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-5A0A0K0K1A5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-5A0A0K0K1A5 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-5A0A0K0K1A5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
TRBV6-5A0A0K0K1A5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
TRBV6-5A0A0K0K1A5 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-5A0A0K0K1A5 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.11■□□□□ 0.17
TRBV6-5A0A0K0K1A5 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-5A0A0K0K1A5 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRBV6-5A0A0K0K1A5 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-5A0A0K0K1A5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-5A0A0K0K1A5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-5A0A0K0K1A5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms