Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAV17A0A0B4J275 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAV17A0A0B4J275 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV17A0A0B4J275 AC026271.2-201ENST00000428091 497 ntBASIC20.77■□□□□ 0.92
TRAV17A0A0B4J275 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAV17A0A0B4J275 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAV17A0A0B4J275 CA15P2-201ENST00000611168 834 ntBASIC20.77■□□□□ 0.92
TRAV17A0A0B4J275 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV17A0A0B4J275 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAV17A0A0B4J275 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAV17A0A0B4J275 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV17A0A0B4J275 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV17A0A0B4J275 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAV17A0A0B4J275 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV17A0A0B4J275 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV17A0A0B4J275 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.76■□□□□ 0.91
TRAV17A0A0B4J275 MIR5787-201ENST00000611784 55 ntBASIC20.76■□□□□ 0.91
TRAV17A0A0B4J275 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.75■□□□□ 0.91
TRAV17A0A0B4J275 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TRAV17A0A0B4J275 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TRAV17A0A0B4J275 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TRAV17A0A0B4J275 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV17A0A0B4J275 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV17A0A0B4J275 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAV17A0A0B4J275 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
TRAV17A0A0B4J275 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAV17A0A0B4J275 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAV17A0A0B4J275 AC009086.3-201ENST00000623486 1008 ntBASIC20.75■□□□□ 0.91
TRAV17A0A0B4J275 AC136469.2-201ENST00000623944 1028 ntBASIC20.75■□□□□ 0.91
TRAV17A0A0B4J275 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV17A0A0B4J275 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAV17A0A0B4J275 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV17A0A0B4J275 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAV17A0A0B4J275 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV17A0A0B4J275 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TRAV17A0A0B4J275 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV17A0A0B4J275 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV17A0A0B4J275 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV17A0A0B4J275 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.74■□□□□ 0.91
TRAV17A0A0B4J275 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
TRAV17A0A0B4J275 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.74■□□□□ 0.91
TRAV17A0A0B4J275 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV17A0A0B4J275 HLA-L-211ENST00000482052 1765 ntBASIC20.74■□□□□ 0.91
TRAV17A0A0B4J275 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
TRAV17A0A0B4J275 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV17A0A0B4J275 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TRAV17A0A0B4J275 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV17A0A0B4J275 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV17A0A0B4J275 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAV17A0A0B4J275 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV17A0A0B4J275 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV17A0A0B4J275 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.73■□□□□ 0.91
TRAV17A0A0B4J275 AC008764.7-201ENST00000593779 1081 ntBASIC20.73■□□□□ 0.91
TRAV17A0A0B4J275 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV17A0A0B4J275 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV17A0A0B4J275 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAV17A0A0B4J275 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.72■□□□□ 0.91
TRAV17A0A0B4J275 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV17A0A0B4J275 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV17A0A0B4J275 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
TRAV17A0A0B4J275 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV17A0A0B4J275 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TRAV17A0A0B4J275 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV17A0A0B4J275 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
TRAV17A0A0B4J275 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV17A0A0B4J275 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAV17A0A0B4J275 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV17A0A0B4J275 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV17A0A0B4J275 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV17A0A0B4J275 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.7■□□□□ 0.91
TRAV17A0A0B4J275 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV17A0A0B4J275 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV17A0A0B4J275 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV17A0A0B4J275 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV17A0A0B4J275 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV17A0A0B4J275 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV17A0A0B4J275 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV17A0A0B4J275 AC099791.1-201ENST00000416440 715 ntBASIC20.7■□□□□ 0.9
TRAV17A0A0B4J275 AC006455.2-201ENST00000429931 906 ntBASIC20.7■□□□□ 0.9
TRAV17A0A0B4J275 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAV17A0A0B4J275 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAV17A0A0B4J275 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV17A0A0B4J275 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.7■□□□□ 0.9
TRAV17A0A0B4J275 ALDH1A3-203ENST00000557963 1670 ntBASIC20.7■□□□□ 0.9
TRAV17A0A0B4J275 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
TRAV17A0A0B4J275 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV17A0A0B4J275 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV17A0A0B4J275 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV17A0A0B4J275 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV17A0A0B4J275 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAV17A0A0B4J275 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.69■□□□□ 0.9
TRAV17A0A0B4J275 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV17A0A0B4J275 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV17A0A0B4J275 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRAV17A0A0B4J275 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAV17A0A0B4J275 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV17A0A0B4J275 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV17A0A0B4J275 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.68■□□□□ 0.9
TRAV17A0A0B4J275 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV17A0A0B4J275 MIR3181-201ENST00000578512 73 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms