Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV41A0A0B4J266 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV41A0A0B4J266 MIR6724-1-201ENST00000616420 92 ntBASIC17.94■□□□□ 0.46
TRAV41A0A0B4J266 MIR6724-2-201ENST00000616483 92 ntBASIC17.94■□□□□ 0.46
TRAV41A0A0B4J266 MIR6724-4-201ENST00000617390 92 ntBASIC17.94■□□□□ 0.46
TRAV41A0A0B4J266 MIR6724-3-201ENST00000622482 92 ntBASIC17.94■□□□□ 0.46
TRAV41A0A0B4J266 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV41A0A0B4J266 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV41A0A0B4J266 AC004812.2-201ENST00000611079 2094 ntBASIC17.94■□□□□ 0.46
TRAV41A0A0B4J266 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRAV41A0A0B4J266 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRAV41A0A0B4J266 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV41A0A0B4J266 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV41A0A0B4J266 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV41A0A0B4J266 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV41A0A0B4J266 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV41A0A0B4J266 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV41A0A0B4J266 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV41A0A0B4J266 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.92■□□□□ 0.46
TRAV41A0A0B4J266 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV41A0A0B4J266 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV41A0A0B4J266 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV41A0A0B4J266 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV41A0A0B4J266 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV41A0A0B4J266 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV41A0A0B4J266 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV41A0A0B4J266 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV41A0A0B4J266 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV41A0A0B4J266 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV41A0A0B4J266 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAV41A0A0B4J266 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAV41A0A0B4J266 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.91■□□□□ 0.46
TRAV41A0A0B4J266 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV41A0A0B4J266 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
TRAV41A0A0B4J266 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV41A0A0B4J266 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV41A0A0B4J266 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV41A0A0B4J266 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV41A0A0B4J266 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV41A0A0B4J266 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRAV41A0A0B4J266 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.9■□□□□ 0.46
TRAV41A0A0B4J266 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRAV41A0A0B4J266 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV41A0A0B4J266 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV41A0A0B4J266 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TRAV41A0A0B4J266 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV41A0A0B4J266 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV41A0A0B4J266 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV41A0A0B4J266 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TRAV41A0A0B4J266 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV41A0A0B4J266 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV41A0A0B4J266 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV41A0A0B4J266 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV41A0A0B4J266 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRAV41A0A0B4J266 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV41A0A0B4J266 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV41A0A0B4J266 AC093323.1-202ENST00000635031 2045 ntBASIC17.88■□□□□ 0.45
TRAV41A0A0B4J266 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV41A0A0B4J266 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV41A0A0B4J266 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV41A0A0B4J266 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV41A0A0B4J266 ABCB10P4-201ENST00000566803 2184 ntBASIC17.88■□□□□ 0.45
TRAV41A0A0B4J266 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV41A0A0B4J266 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV41A0A0B4J266 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV41A0A0B4J266 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRAV41A0A0B4J266 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TRAV41A0A0B4J266 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV41A0A0B4J266 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAV41A0A0B4J266 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV41A0A0B4J266 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV41A0A0B4J266 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV41A0A0B4J266 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV41A0A0B4J266 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV41A0A0B4J266 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TRAV41A0A0B4J266 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV41A0A0B4J266 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV41A0A0B4J266 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV41A0A0B4J266 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV41A0A0B4J266 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV41A0A0B4J266 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV41A0A0B4J266 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.86■□□□□ 0.45
TRAV41A0A0B4J266 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV41A0A0B4J266 AL356740.2-201ENST00000601559 647 ntBASIC17.86■□□□□ 0.45
TRAV41A0A0B4J266 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV41A0A0B4J266 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV41A0A0B4J266 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV41A0A0B4J266 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV41A0A0B4J266 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV41A0A0B4J266 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV41A0A0B4J266 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV41A0A0B4J266 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV41A0A0B4J266 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV41A0A0B4J266 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
TRAV41A0A0B4J266 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV41A0A0B4J266 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV41A0A0B4J266 AC131212.1-201ENST00000613771 668 ntBASIC17.85■□□□□ 0.45
TRAV41A0A0B4J266 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
TRAV41A0A0B4J266 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV41A0A0B4J266 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms