Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 ALDH1A3-203ENST00000557963 1670 ntBASIC20.73■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.73■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.73■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 ABCB10P4-201ENST00000566803 2184 ntBASIC20.73■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.72■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 MIR6722-201ENST00000617286 78 ntBASIC20.72■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.72■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.72■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.72■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.71■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.71■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.71■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.71■□□□□ 0.91
TNFSF12-TNFSF13A0A0A6YY99 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.7■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.7■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.7■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.7■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.69■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.69■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.69■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 AC010997.5-201ENST00000609182 354 ntBASIC20.69■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.69■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.68■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.68■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 MTDHP2-201ENST00000601468 714 ntBASIC20.67■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.67■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.67■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.67■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms